Medicago truncatula (barrel medic): 25496859
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Entry
25496859 CDS
T01716
Name
(RefSeq) protein phosphatase PP2A regulatory subunit A
KO
K03456
serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25496859
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mtr01009
]
25496859
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25496859
03036 Chromosome and associated proteins [BR:
mtr03036
]
25496859
Protein phosphatases and associated proteins [BR:
mtr01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
25496859
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
25496859
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
25496859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT
PPP2R1A-like_HEAT
HEAT_2
Vac14_Fab1_bd
Htt_N-HEAT_1
HEAT_EF3_N
HEAT_EZ
PDS5
CLASP_N
Cnd1
Motif
Other DBs
NCBI-GeneID:
25496859
NCBI-ProteinID:
XP_013453022
UniProt:
A0A072UMF9
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Position
6:39222178..39232287
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AA seq
587 aa
AA seq
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MAMVDQPLYPIAVLIDELKNEDIQLRLNSIRRLSTIARALGEERTRKELIPFLSENNDDD
DEVLLATAEELGVFVPYVGGVEHASVLLPPLETLCTVEETCVRDKSVESLCRIGAQMREQ
DLVEHFIPLVKRLASGEWFTARVSSCGLFHIAYPSAPEALKTELRAIYGQLCQDDMPMVR
RSAATNLGKFAATVEAAHLKSDIMSVFDDLTQDDQDSVRLLAVEGCAALGKLLEPQDCVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPDSTKTELVPAYVRLLRDNEAEVRIAA
AGKVTKFSRILSPELAIQHILPCVKELSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGALCMQWLKDKVYSIRDAAATNIKRLAEEFGPEWAMQHIIPQV
LDMVNDPHYLYRMTILHAISLLAPVLGSEITTTNLLPLVVNAAKDRVPNIKFNVAKVLQS
LIPIVDESVVESTIKPCLVELSEDPDVDVRFFASQALQSSDQVKMSS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggtagatcaacctctatatccaatcgcggttctaatcgacgaactaaagaac
gaagacattcaactccgcttaaactcgatccgtcgtctttcaacaatcgcacgcgctctc
ggcgaagaaagaacaagaaaggagttgattccatttctgagcgagaataacgacgatgat
gatgaagtgcttcttgcgacggcggaggaattaggagtttttgtgccgtatgttggtggt
gttgaacatgctagtgttttgcttccgccgttggagactctttgcactgttgaggagact
tgtgttagggataagtcggttgagtcgctttgtagaattggtgctcagatgagggagcaa
gatttggttgagcatttcattcctttggttaagaggctggcttctggtgagtggttcaca
gcccgggtttcttcatgtggcttgtttcatattgcctaccctagtgcaccggaggcgttg
aaaactgaactgagggccatatatgggcagctgtgccaagatgatatgcctatggttagg
agatctgctgctaccaacctgggaaaatttgctgcaactgttgaagctgctcacttgaaa
tctgacatcatgtctgtgtttgatgatctcacacaggatgatcaagattctgttcgtctt
cttgctgttgagggttgtgcagctcttggaaaattgttggagcctcaagattgtgtggca
catattcttcctgttatagttaacttttctcaggataagtcatggcgtgttcgttacatg
gttgccaatcaactctatgagctctgtgaagctgttggtcctgattccaccaagacggaa
ttggtacctgcatatgttcggctgctgcgtgataatgaggctgaagtacgtattgctgct
gctgggaaagtgaccaagttctcccgcatattaagtcctgaactagccattcagcatatt
ctaccatgtgtaaaggaattatcgacagattcatctcaacatgttcgctctgcactggct
tcagttataatgggaatggcaccagtcttggggaaggatgcgacaattgagcaacttctc
cctattttcctctctcttttgaaagacgagtttcctgatgtcaggctaaatatcatcagc
aagcttgatcaagtgaaccaggttattggtattgatctgttatctcagtcgctattacca
gctattgttgagctcgctgaggatcggcactggagagttagacttgcaatcatagaatat
atacccttgttagcaagtcagttaggtgtaggcttttttgatgataagcttggagctctt
tgcatgcaatggcttaaggacaaggtatactcaatccgcgatgcagctgctactaatatt
aaacgcttagcagaagaatttggaccagaatgggcaatgcaacacattattccccaggtt
ttggacatggttaatgatccacattatctgtatcgaatgacgattcttcatgcaatttct
ctgttagctcctgttctgggatcagaaattactactacaaacctgctgcctctagtcgtt
aatgcagcaaaagatagggtacccaatatcaaattcaatgttgctaaagtattgcagtct
ctcattccaattgttgatgaatctgttgtggagagcaccatcaaaccatgtctggttgag
ctcagtgaggatccagatgttgatgtgaggtttttcgcctctcaagcgctacaatctagt
gatcaagtgaagatgtccagctag
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