Medicago truncatula (barrel medic): 25496888
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Entry
25496888 CDS
T01716
Name
(RefSeq) ribosome maturation protein SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
25496888
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25496888
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
25496888
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
zf-C2H2
Motif
Other DBs
NCBI-GeneID:
25496888
NCBI-ProteinID:
XP_013453051
UniProt:
A0A072UBA1
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All DBs
Position
6:39524306..39529880
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AA seq
358 aa
AA seq
DB search
MSRSLVQPIGQKRLTNVAVVRLKKHGMRFEIACYPNTVLSWRSGVEKDIDEVLQSHTVYT
NVSKGVLAKSKDLNAAFGTDDHSSICLEILKKGELQVAGKERESMLSSQFRDIATIVMHK
TFNPETKRPYTISMIERLMRDIHFAVDPNSTSKKQALELIQELQKHYPIKRCPLRVRAAA
PEEEVPILLEKLSEWKATVISKEGTAAQLSVVFELEPGLYKDCHDFVMNKMHGRFEVLAH
SLYVDGDTHVDYNDHEDMPAPLPQRTPESVLELNDKLQKQTISSGPKPNEGQQPKQNKCN
TCDACFEDAKLYREHHKSEWHKHNMKRKTRQLPPLSEEECTADMELFESKSDLKDYSF
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgttcgttggttcaaccaataggtcaaaagcgattaacaaacgtagcagttgtt
cgtctgaagaaacacggcatgcgtttcgaaatcgcttgttaccctaacactgttctttca
tggcgttccggcgttgaaaaggatattgatgaagtgttgcagtcacatacggtttatacg
aatgtttcgaaaggtgttcttgctaagtctaaggatttgaatgctgcgtttggtactgat
gatcattccagtatttgcttagagattttgaagaagggggaacttcaggttgctggtaaa
gagagggagtcaatgctgtctagtcagttcagggacattgccaccattgtaatgcacaag
acttttaatcctgagactaagcgcccttacactatcagcatgattgaacgcctcatgagg
gatatccattttgctgttgatccaaacagcacctccaagaagcaggctctggagttgatt
caggagcttcagaagcactaccctataaaacggtgtccattgagggtacgcgctgctgcc
cctgaagaggaagtacccatccttttggaaaagctgagcgagtggaaggcaaccgttatt
tctaaagaagggacagctgctcagctatctgttgtttttgaattggagcctggtctgtat
aaggattgtcatgactttgttatgaataagatgcatggaagatttgaagttcttgcccac
tctctttatgtggatggggatactcatgtggattacaatgatcatgaggacatgcctgca
ccattgcctcaaagaactcctgaatctgtgcttgagctgaatgataaacttcaaaagcaa
acaatttcgtctggacctaagcctaatgagggacaacaaccaaagcaaaataagtgcaac
acatgtgatgcttgttttgaagatgctaagttgtacagggaacaccacaagagtgagtgg
cacaagcacaatatgaagcgtaaaacaaggcaacttcctccactatctgaagaagagtgc
acggcggatatggaattgtttgaatcaaaatctgatttgaaggattattcattttga
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