Medicago truncatula (barrel medic): 25496990
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Entry
25496990 CDS
T01716
Name
(RefSeq) serine/threonine-protein kinase VPS15 isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
25496990
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mtr01001
]
25496990
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25496990
Enzymes [BR:
mtr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
25496990
Protein kinases [BR:
mtr01001
]
Serine/threonine kinases: Other
VPS15 family
25496990
Membrane trafficking [BR:
mtr04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
25496990
Autophagy
Autophagosome formation proteins
PI3K complex
25496990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS15-like_hel
Pkinase
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
WDR55
HEAT
PK_Tyr_Ser-Thr
Beta-prop_EML_2
EIF3I
NBCH_WD40
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
HEAT_2
WDR90_beta-prop_4th
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
GCFC
PEP5_VPS11_N
Vac14_Fab1_bd
Cohesin_HEAT
APH
TCAD9
Beta-prop_HPS5
HEAT_EZ
Tti2
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
25496990
NCBI-ProteinID:
XP_013453197
UniProt:
A0A072UMY9
LinkDB
All DBs
Position
6:complement(41469862..41479668)
Genome browser
AA seq
1536 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHELPSTYNLVLKEVLGRGRFFKSIQCKHDEGLVLVKVYFKRG
DSINLSEYERRISTIKEIFSSIDHPHVWPFQFWQETDKAAYLLRQYFFHNLHDRLSTRPF
LSFVEKKWLAFQLLLAVKQSHEKGVCHGDIKCENVLITSSNWLYLADFASFKPTYIPYDD
PSDFSFFFDTGGRRLCYLAPERFYENGGEMQVAQDAPLKPSMDLFAVGCVIAELFLEGQP
LFELSQLLAYRRGQHDPSQHLEKIPDIGIRKMIQHMIQLEPESRFSAEMYLKEYAGVVFP
TYFSPFLHDFYRCWSPLHSDMRVLLCQSAFQEILKQMMNKQSSDDAGVTSGELLEEMVAK
ESASFMDSRRKREDIGKGLVHDQYELLGDINSLLRDAKNNNKSPAGPQQGIGNAQNSTFP
ENLKSLQSPGELLQTISNAFRGNDHPFLKSITMKDLNSLMSEYDSQSDTFGTPFLPLPKD
TMRCEGMVLITSLLCSCIRNVKLPHLRRAAVLLLKASALYIDDEDRLQRVIPYVIAMLSD
TAAIVRCAALETLCDILPIVREFPPSDAKIFPEYIFPMLSMLPDDPEESVRICYASNIAK
LALTAYGFLIHSISLSEAGVLDELSLPQKPFTSSTQTPGRMMINSDVQLLQLRKSIAEVV
QELVMGPKQTPNIRRALLQDIGKLCYFFGVRQSNDTLLPILPAFLNDRDEQLRTVFYEKI
VYVCFFVGQRSVEEYLLPYIEQALSDMTEAVIVRALECLAILCKNGFFRKRILLQMIERA
FALLCYPSEWVRRSVVSFIAASSESLGAVDSYVFLAPVIRPFLRRQPVSLASEKALLSCL
KPPVSRQVFYEVLENSRSSDMLERQRKIWYSSSQSKIWEMDLLKKGIDELDSLKSWAEKQ
QGSEAQQIVGTGIQQPGLSDNDKAESKFRDMGAFMHNDSNMLGQRDPQFSEKLQFSGFMS
PTFSGANSLTYDKPSEGIPLYSFSVDRRGMGIPPAASDSPLQMNSLGVSSSAMPWVNPLS
KSFNLANSVPSPKLFSGSFSINNGTKQFHRVVHEPDPKENETAFLNSTFQDVGLSSNNKG
TSISLEDATTQADLSGFQSFARTSIPDSGWRPRGVLVAHLQEHRSAVSDIAVSSDNSFFV
SASDDSTVKIWDSKKLEKDISFRSKLTYHLEGSHALCVAMLPGSAQVIVGASDGFIHMFS
VDHISRGLGNVVEKYSGIADVTKKDTKEGAILGLLNCPMDNNSIMYSTQNCGIHLWDTRS
NSNSWTLKATPDEGYALSLASGPCSNWFVSGSSRGVITLWDLRFLVPVNSWKYSLACPIE
KICLFLPPPNASLSSTTRPLVFVAAGCNEVSLWNAENASCHQVLRTANYDSDAEMSDMPS
ALAKPSSKPTSQSDPRRNVNRKYRVDELNEPPPRLPGIRTLLPLPGGDLLTGGTDLKIRR
WDHYSPDKSYCICGPNLKGVGNDDFYETKSSFGVQVVQETKRRPLATKLTPKAILAAAAT
DSAGCHRDSIVSVASVKLNQRLLLSSGRDGAIKVWK
NT seq
4611 nt
NT seq
+upstream
nt +downstream
nt
atggggaacaaaatcgcacgaacgacgcaagtatcagcgtcggagtattacctacacgag
ttaccatcaacgtataatctagttctgaaagaagttcttggacgcggtcgattcttcaaa
tcgattcagtgtaagcatgatgaaggtttggttcttgttaaggtttatttcaaacgcggt
gattctattaatctttcggagtatgaacggaggatttcgacgattaaggagatttttagt
agtattgatcatcctcatgtttggccttttcagttttggcaagaaacagataaagcagct
tatcttttgaggcaatatttcttccataatttgcatgatcgactaagcactcgacctttt
cttagtttcgttgagaagaaatggttggcttttcagttgcttttagctgtaaaacagagc
cacgagaagggagtttgtcatggtgatatcaagtgtgaaaatgtgctaattacgtcctca
aattggctttaccttgctgactttgcatctttcaaacccacatacataccgtatgacgat
ccatctgatttctcttttttctttgacacgggtggaagaagactctgttatctggcacct
gagagattttatgaaaatggaggggagatgcaggtggcacaagatgcccctctaaagcca
tctatggatttatttgctgttgggtgtgtaatcgctgaacttttccttgagggccaacca
ctatttgaactgtctcaacttcttgcgtatcgcagagggcaacatgatccaagtcaacat
cttgaaaaaataccagatattggaatccgtaagatgattcagcacatgattcagttagaa
ccagagtctcgattttcggctgaaatgtatctaaaggaatacgctggagttgtattccct
acctatttttcaccatttctgcatgatttttaccgttgctggagtcctctccattctgat
atgagggttttactatgccagagtgctttccaggagatacttaaacaaatgatgaacaaa
cagtcatccgatgatgcaggtgtgacctctggagaacttttggaagagatggttgccaaa
gaaagcgcaagtttcatggactcacgaaggaaaagagaggacataggcaaaggcttagtt
catgatcagtatgaacttcttggtgatattaatagcttactgagggatgctaaaaataat
aataagagtccagctggtcctcagcaaggaataggaaatgcacagaattcaacctttcct
gaaaatctaaaaagtttgcagtctcctggtgagctgcttcaaactatatcgaatgcattt
cgaggaaatgatcatccctttttaaaaagtattactatgaaagacttaaattcattgatg
tccgaatatgatagtcagtcggatacatttggaacaccctttctaccattaccaaaggat
actatgagatgtgaaggcatggttttgataacttctttgctctgctcctgcatacgcaat
gtcaagttgcctcacctaaggagggcagctgtactcttgttgaaggcttctgccctatat
attgatgatgaagatcgtttgcagcgtgtgattccatatgtgattgcaatgctttctgat
acagcagcaattgttcgttgcgctgctttggagactttgtgtgacattctgcccatagtg
cgggagtttcctcctagtgatgcaaagatatttcctgagtatatttttcctatgctttct
atgcttcctgatgatcctgaggaaagtgtgaggatatgttatgccagcaacatagctaag
cttgcgctcactgcttatggattcttgatacactcaataagcttgagtgaggcaggtgtc
cttgatgaactgagtttgccacagaagccatttacatcatccacccagaccccggggagg
atgatgataaatagtgatgtccagcttctgcagctgaggaaatcaattgcagaggttgtt
caagaacttgttatgggtccaaagcaaacgccaaatattaggagagcgcttcttcaggac
attggtaaactttgctacttttttggtgtgagacagagtaatgacactctcttacctatc
cttcccgccttcttaaatgatcgagatgagcaattaaggacggtattctatgagaagatt
gtttatgtttgcttttttgtgggacaaagaagtgtagaggaatatctattaccttacatt
gagcaagctttaagtgacatgacagaagctgtcattgttagagccttagaatgtttggct
attctatgcaaaaatgggttcttccggaagaggatattgcttcaaatgatagagcgcgcc
tttgctttattgtgttatcctagtgaatgggtacgaagatcagttgtgtctttcattgct
gctagtagtgagagcctgggtgcagtggattcatatgttttccttgctcctgttatacgc
cctttccttcgtagacaacctgtatctcttgcttcagagaaagctcttttgtcatgttta
aaacctcctgtctcaagacaggttttctatgaagtcttggagaactccagaagctcggac
atgttagaaagacagagaaagatatggtatagttcatcacagtctaaaatatgggaaatg
gatttacttaaaaaaggaattgatgagttggactcattaaagagctgggctgaaaagcaa
cagggttctgaggctcaacaaattgttggaactggcatccaacagccagggctatctgat
aatgacaaagctgagtctaaatttagagatatgggggcctttatgcataatgatagcaac
atgttgggacaacgtgatccgcagttctcggagaagttacagttttcaggatttatgtca
ccaacctttagtggtgcgaacagtttgacatatgacaagccatcagaaggcataccttta
tactccttcagtgtggacaggagaggaatgggaatacctcccgcagcttctgattctcca
ttacaaatgaattctctgggtgttagttcatctgcaatgccttgggttaatccacttagt
aagtcctttaatttggccaattcagttccatcaccaaagcttttttcaggttcttttagc
atcaacaatggtactaaacagttccaccgagtggtacatgaaccagatcctaaggaaaat
gagacagcctttctcaatagcacatttcaagacgtcggactatcttctaataataaaggt
acatcaatttcactagaagatgctactacccaagctgatttatcaggatttcaatctttt
gctcggacatccatccctgattctggatggaggccacgtggggtgttggttgcacacctc
caggagcatcgttcagctgtcagcgacatagctgtttcttctgacaatagcttttttgtg
agtgcatccgatgactcgacagtcaagatttgggattccaaaaagctggaaaaagacatt
tcgttcaggtcaaagctaacttatcacctggagggaagccatgcgctatgtgtagcaatg
cttccaggttcagcacaagtgatagttggagcatctgatggatttattcatatgttttct
gttgatcatatctctagaggtctaggaaatgttgttgagaagtattctggtattgctgat
gtcacaaagaaggataccaaagaaggtgcaatacttggccttttaaattgccccatggat
aataacagcattatgtatagcacccagaactgtggcattcatctatgggatacgaggtca
aattccaattcttggacgttaaaagctactcctgatgagggctacgccttgtccctagca
tcagggccttgttccaactggtttgtatcagggtcgtccaggggtgtaattacactttgg
gatctgagatttcttgtacctgtaaactcttggaagtattctcttgcttgtcctatagaa
aagatttgtctcttccttcctcctccaaatgcttctctgtcttcaaccactaggcccctt
gtttttgtggccgcgggttgcaatgaagtttctctttggaatgcagagaatgctagctgc
caccaggtactgaggacggccaattatgacagtgatgcagaaatgtccgatatgccttcg
gccttggccaaaccttcaagtaagccaacttctcagtcagatccaagacgaaatgttaat
cgcaagtacagagttgatgagctaaatgaacctcctccccgtcttcctggtattcgcaca
ttacttcccttaccaggtggtgatttattgactgggggcactgatttaaagatacgtcga
tgggatcattacagtcctgacaaaagctactgcatttgtggacctaacctaaaaggagtt
ggaaatgacgacttttacgaaacaaaatctagttttggagtgcaagttgtacaggagaca
aaaagacggcctcttgcaaccaagctgacaccaaaggcaattctcgcagctgctgccact
gattccgctggttgccatcgtgattctattgtgtctgtggcttcagttaagttaaaccag
agacttctactctcaagtggtagagatggggccatcaaggtttggaagtaa
DBGET
integrated database retrieval system
