Medicago truncatula (barrel medic): 25497284
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Entry
25497284 CDS
T01716
Name
(RefSeq) replication factor C subunit 3
KO
K10756
replication factor C subunit 3/5
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
mtr03410
Base excision repair
mtr03420
Nucleotide excision repair
mtr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25497284
03410 Base excision repair
25497284
03420 Nucleotide excision repair
25497284
03430 Mismatch repair
25497284
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
25497284
03036 Chromosome and associated proteins [BR:
mtr03036
]
25497284
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25497284
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
25497284
DNA Replication Termination Factors
ELG1-RFC complex
25497284
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
25497284
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
25497284
Check point factors
HRAD17(Rad24)-RFC complex
25497284
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC_C
RCF1-5-like_lid
DNA_pol3_delta2
AAA
Rad17
AAA_lid_RFC1
Sigma54_activ_2
DUF815
ABC_tran
RsgA_GTPase
nSTAND6
AAA_22
RuvB_N
AAA_5
AAA_16
AAA_23
AAA_29
nSTAND3
TsaE
AAA_24
AAA_2
SprT-like
Motif
Other DBs
NCBI-GeneID:
25497284
NCBI-ProteinID:
XP_013452656
UniProt:
A0A072UA77
LinkDB
All DBs
Position
6:complement(33283638..33289908)
Genome browser
AA seq
354 aa
AA seq
DB search
MLWVDKYRPKTLDHAMVHSDIAQNLKKLVTEHDCPHLLFYGPSGAGKKTLIMALLRQMFG
PGAEKVKVENRAWKVDAGSRSIDLELTTLSSANHIEMTPSDAGFQDRYIVQEIIKEMAKN
RPIDTKGKKGFKVLVLNDVDKLSREAQHSLRRTMEKYSAYCRLVLCCNSSSRVTEAIRSR
CLNVRINAPSEEQIVEVLQFIGKKEGLQLPSSLAARIAEKSNRNLRRAILSFETCRVQQY
PFTDKQTIPPMDWEEYISEIASDIMKEQSPKRLFQVRGKLYELLTNCIPPEIILKRLLYE
LLRKLDAELKHEVCHWAAYYEHRMRLGQKAIFHIEAFVAKFMSVYKSFLIATFG
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgttgtgggttgacaagtaccgtcccaaaactcttgaccatgctatggttcacagcgac
atcgctcaaaatctcaagaaattggttactgaacatgattgccctcatttgttgttctat
ggcccatcaggcgctggcaagaaaacactcatcatggctcttctccgccaaatgtttgga
cccggtgctgagaaggtgaaggtggaaaatagggcatggaaagtggatgctggaagtaga
tctatagatttagagctgactacattatcaagtgcgaaccacatcgaaatgactccaagt
gatgcaggctttcaggacagatacattgttcaagaaataatcaaagaaatggctaagaat
agacccattgatactaaagggaagaaaggatttaaagtactagtgcttaatgatgttgac
aaactctctagagaagctcaacattctctccgcagaacaatggagaaatacagcgcttat
tgcagattagttctatgttgcaatagctcttcaagagtcacagaagcaatccgctcccgt
tgtcttaatgtgcgaattaatgcaccaagtgaagaacagattgttgaagttttacagttc
attggtaagaaagaagggctgcaacttccttctagtttggctgctcgcatagcagagaaa
tcaaatcggaatttaaggagggccatattgtcatttgagacttgtcgtgtccaacagtat
cctttcaccgacaagcaaacaattcccccaatggactgggaggaatatatttctgaaatt
gcatctgacataatgaaggaacagagcccaaaaaggttgtttcaagttcgaggaaagctg
tatgagctgctgaccaattgcattcctcccgagatcattttgaagagacttctttatgag
ctattgaggaaacttgatgcggaactgaagcatgaagtctgccattgggcagcatattat
gagcataggatgcgccttggacagaaggcaatttttcacattgaagcatttgtggctaag
tttatgagcgtctacaagtccttcctcatcgcaacattcggctga
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