Medicago truncatula (barrel medic): 25497340
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Entry
25497340 CDS
T01716
Name
(RefSeq) probable cyclic nucleotide-gated ion channel 20, chloroplastic
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
25497340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
25497340
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
25497340
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Motif
Other DBs
NCBI-GeneID:
25497340
NCBI-ProteinID:
XP_013452813
UniProt:
A0A072UBK3
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Position
6:35867092..35872982
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AA seq
700 aa
AA seq
DB search
MESQKTQTSLKNGHDGALCSVVVIENKVDNFKTEKVSPFNVKGEKHWNNNHDGENEHLEK
SGLLGMCDDPYCTTCPTYFKASQHTNPKYSNEFNPKFQNALYGDAKGFGRDFFSFCSSCV
PGVINPHTKLVQQWNKFLAIFCMLAIFVDPLFLFLIYVQKDFNCIAIDWRMTETLVLLRS
MNDFVYFLNILLQFRLAYVSPESRVVGAGDLVDDPKKIAVRYLQSYFLLDLFVVLPLPQI
MILTVLPRHLGLSGANYAKNLLRAVILVQYIPRLFRILSLLNGRSPTGFIFESARANFII
NLLMFMLASHVVGSSWYLFGLQRVNQCLRDACNKSNIKGCIDIIDCGHGRNGTYQLSDQT
SVMWNNNSDAIACLNPSPNGFRYGIYVTAVPLTFETNVVNKYVYSHFWGLQQISTLAGGL
TPSYFVWEVLFTIAIIGLGLLLFALLIGNIQNFLQGLGRRRLEMLLRSRDVEQWMRHRRL
PEDLKRRVQQAERYNWAATRGVNEETLLENFPEDLQIDIRRHLFNFIKKIRIFSLMDEPI
LDAICERLRQKTYINGSKIMSKGGVVGKMVFVVRGKLESIGENGIGVSLSEGDACGEELL
TWYLEQSSVSKDGKKVRLPGQRLISNRTVKCLTNVEAFSLKAADLEEVTTIFTRSFRSFL
VQGPLRYESPYWRSLAATRIQVAWRYCKKRQKLSNPTLKL
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggagtcacagaagacacaaactagtctaaaaaatggacatgatggtgcactatgtagt
gtagttgtgatagaaaacaaagtagataatttcaagacagaaaaagtttctcctttcaat
gtcaaaggtgaaaaacattggaataataaccatgatggagaaaatgaacatttagagaaa
tctgggctattaggaatgtgtgatgatccttattgtactacttgtcctacttacttcaag
gcttctcaacacacaaatccaaaatattcaaatgaatttaatcccaagttccaaaatgca
ctttatggagatgccaagggttttgggagagattttttctctttctgctcttcatgtgtt
cctggagttataaaccctcacactaaacttgttcaacaatggaacaaatttctggccatt
ttttgcatgctggcaatttttgtggatccattatttttattcttaatatatgtgcagaag
gactttaattgtattgctattgactggagaatgacagaaacacttgttttgcttagaagc
atgaatgattttgtatatttcttaaacattcttctccagtttaggttggcctatgtttct
ccagagtcaagggtggttggtgccggagatttagttgatgatcccaagaaaattgcagtc
cgctacctgcagagttattttcttcttgacttatttgttgtcttgcctcttcctcaaata
atgatactaactgtgttaccgaggcacttgggtttatcaggagcaaattatgctaagaat
cttctacgtgcggtgattcttgtgcaatatattccaagattatttagaattttgtctctg
ctaaatggaaggtctccaactggattcatatttgagtcggcaagggctaatttcatcata
aatcttctcatgtttatgcttgcaagccatgttgttggatcctcctggtacctctttggt
ctacagagggtaaatcaatgtttgagagatgcttgcaataagtcaaacatcaaaggatgc
attgatatcattgactgcggccatggtcgtaatggaacttaccagttatcagaccaaaca
tcagttatgtggaacaacaattcagatgccattgcttgtttgaatccttctccgaatggt
tttcgttatggaatctatgtcactgctgtaccgcttacctttgaaactaacgtggtcaac
aaatatgtatattctcatttttggggattgcagcaaatcagtactctagctgggggtcta
acaccaagctattttgtatgggaagttctttttacaattgcaatcataggattgggactc
ttgctttttgcacttctcattggaaacatacagaactttctccaaggtcttggaagaagg
aggctagaaatgctacttagaagtcgcgatgttgagcaatggatgaggcatcgtcggtta
cctgaagatctcaaaaggagagtacaacaggctgagcggtataattgggcggcaacaaga
ggagtgaatgaagaaacacttcttgagaattttccggaagatctccaaattgacataagg
cgtcatctcttcaattttattaagaaaattagaattttctcattgatggatgagcctatt
ttagatgcaatttgtgagagactaagacaaaaaacatacataaatggaagtaaaattatg
agtaagggtggtgtagttggaaagatggtgtttgtagtgcgaggaaaattggagagcatt
ggagaaaatggaattggagtttctttatctgaaggagatgcttgtggtgaagaacttctt
acatggtatcttgaacaatcttcagtaagcaaagatggtaaaaaagtaaggcttccagga
cagagattaattagcaacaggacagtaaagtgcttaacaaatgtggaggcattttcacta
aaagctgctgatcttgaagaagtcacaaccattttcacaagatcctttaggagttttctt
gttcaaggacctttaaggtatgaatcaccttattggagatccctagcagcaacccgaatt
caggttgcatggagatattgcaagaaacgtcaaaagttatcaaatccaacattgaagtta
tag
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