Medicago truncatula (barrel medic): 25497360
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Entry
25497360 CDS
T01716
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1-3
KO
K03265
peptide chain release factor subunit 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
25497360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25497360
03012 Translation factors [BR:
mtr03012
]
25497360
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
25497360
Translation factors [BR:
mtr03012
]
Eukaryotic type
Release factors
25497360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
acVLRF1
baeRF_family10
Motif
Other DBs
NCBI-GeneID:
25497360
NCBI-ProteinID:
XP_013452837
UniProt:
A0A072UM30
LinkDB
All DBs
Position
6:36259232..36263941
Genome browser
AA seq
436 aa
AA seq
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MADAHDTDKNIEVWKIKKLIKALEAARGNGTSMISLIMPPRDQIARVTKMLGDEFGTASN
IKSRVNRQSVLGAITSAQQRLKLYNKVPPNGLVLYTGTIVTDDGKEKKVTIDFEPFRPIN
ASLYLCDNKFHTEALNELLESDDKFGFIVMDGNGTLFGTLSGNTREVLHKFSVDLPKKHG
RGGQSALRFARLRMEKRHNYVRKTAELATQFYINPATSQPNVAGLILAGSADFKTELSQS
DMFDPRLQAKILNVVDVSYGGENGFNQAIELSSEILSNVKFIQEKRLIGKYFEEISQDTG
KYVFGVDDTLQALDAGAVETLIVWENLDMNRYVLKNSTTGEVVIKHFNKEQEAKQSNFRD
PETAADYEVQEKTSLLDWFANEYRRFGCTLEFVTNKSQEGSQFCRGFGGIGGILRYQLDM
RTFDDFSDDGGVYEDE
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgctcatgatactgataagaacattgaggtgtggaaaatcaagaaattgatc
aaggctcttgaagctgccagaggaaatgggacgagtatgatttctcttatcatgccccca
cgtgatcaaattgctcgtgttactaagatgcttggcgatgagtttggaactgcttcaaac
atcaagagtagggtgaatcgacagtctgtgcttggtgcaatcacttctgctcagcagagg
cttaagctttataacaaggtccctccaaacgggcttgttttgtatactggtacaattgtg
actgatgatggtaaggagaaaaaggtgaccattgattttgaaccatttagacctatcaac
gcgtctctctatctttgtgacaacaagtttcacactgaagctctcaatgagctattggaa
tctgatgacaagtttggatttattgtcatggacggtaatggcacattgttcgggaccttg
agtggtaatacaagagaggtgcttcacaagttcagtgtcgatcttccaaagaaacatgga
agaggagggcaatctgccctgcgttttgctcgtcttcgcatggagaagcgtcataactac
gtgaggaagactgctgagcttgcaacccagttttatatcaatcctgctaccagccagcct
aatgtggctggattaattcttgctggttctgctgatttcaaaactgagcttagtcagtca
gatatgtttgatccccgtcttcaggcaaaaatacttaatgttgtagatgtatcttatgga
ggtgagaatgggtttaatcaggctattgaactatcttctgaaattctgtccaatgtcaag
ttcattcaggagaaacgcttgattggaaaatactttgaggaaatcagtcaggatactggg
aagtatgtctttggtgttgatgatacacttcaagctctggatgctggagctgttgagaca
ctaattgtctgggaaaatctggatatgaataggtatgttttaaaaaatagtactactggt
gaagttgtcattaagcacttcaacaaggagcaggaagccaagcagagcaattttagagat
cctgaaactgctgctgattatgaggttcaggaaaagacgtctctgttggactggtttgca
aatgaatacagacggtttggttgcacgctcgagtttgtcaccaataaatcacaagaaggc
tcacagttttgcaggggttttggtgggataggtgggatcttgcgctaccagcttgatatg
agaacatttgatgatttttctgatgatggaggcgtgtatgaagacgaatag
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