Medicago truncatula (barrel medic): 25497801
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Entry
25497801 CDS
T01716
Name
(RefSeq) chaperone protein ClpB1
KO
K03695
ATP-dependent Clp protease ATP-binding subunit ClpB
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
mtr03110
]
25497801
Chaperones and folding catalysts [BR:
mtr03110
]
Heat shock proteins
HSP100
25497801
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
Clp_N
AAA_16
AAA_22
Sigma54_activat
nSTAND3
bpMoxR
AAA_14
AAA_18
AAA_7
TniB
IstB_IS21
ATPase_2
AAA_28
AAA_23
RNA_helicase
NACHT
NBD_SMAX1
RuvB_N
TsaE
Roc
Zeta_toxin
AAA_33
Mg_chelatase
ABC_tran
DNA_pol3_delta2
AAA_19
ResIII
T2SSE
AAA_25
DUF4426
DUF2987
DUF87
DASH_Spc19
CLP1_P
Motif
Other DBs
NCBI-GeneID:
25497801
NCBI-ProteinID:
XP_013447976
UniProt:
A0A072TYS6
LinkDB
All DBs
Position
7:10341185..10346336
Genome browser
AA seq
906 aa
AA seq
DB search
MDPRKFTNKTNESFAVARKLAISSGHAQLTPIHLASTLISDLNGIFFQAISNVGGDESAR
SVERVLKQALKKYPTQQPPPQHVPESSSIIKVIERAQEAQKSRGDTHLAIDRLILGILED
SQIADLLTESGVAASRVKLEVENLRSKEGTKVESAYSDSKFEALKTYGRDLVEQAGKLDP
VIGRDEEIRRVVRILSRRTKNNPVIIGEPGVGKTAVVEGLAKRIVRGDVPSNLADVRLFA
LDMGALVAGTQYRGQFEQRLKAVLKEVEDAEGKVIVFIDEIHLVLGAGQCQGSMDAANLL
KPMLARGQLRCIGATTLDEYRKYVEKDAAFERRFQQVHVSEPSVPDTISILRGLKEKYEG
HHGVRIQDRAIVVAAQMSSRYITGRRLPDKAIDLVDEACANVRVQLDSQPEEIDNLERKR
MQLEVELHALEKEEDKASKARLVDVRKELDNLRDKLQPLKMKYIKEKERIDEIRSLKQKR
EELLFALQEAERRYDLARAADLRYGAIEEVENAIKNLEGSTDGNKGENLMLTETVGPDQI
AEVVSRWTGIPVTRLGQNDKERLVGLGDRLHTRVVGQDQAVKAVAGAVVRSRAGLGRPQQ
PTGSFLFLGPTGVGKTELAKALAQQLFDNENQMVRLDMSEYMEKYSVSRLIGAPPGYVGH
DEGGQLTEAVRRRPYSLVLFDEVEKAHTSVFNTLLQVLDDGRLTDGQGRTVDFRNTVIIM
TSNLGADHLISGLSGNCTMQVARDRVMLEVKKHFRPELLNRLDEVVVFDPLSHEQLRKVA
RLQMKDVASRLAERGIALAVTDPALDYILAESYDPVYGARPIWWLEKNVVTELSMMLIRE
EIDENTTVCIDAGPKGSDLVYRVEKNGGIVNAETGVKSDILIQIPNGPKIVGENGYEVIG
DDEMEE
NT seq
2721 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgaaagtttacaaacaaaacaaacgaatcatttgctgttgctagaaaacta
gcaataagttcaggacatgctcagctcactcccatacaccttgcatccactttaatttct
gatctcaatggtatatttttccaagcaatttccaatgtcggtggtgacgaatctgcacgt
tccgtggaaagagttttaaaacaagccctgaaaaaatatcctactcaacagcctccacca
caacatgtaccagaaagctcttccattatcaaagtcattgaaagagcacaggaagcacag
aagtcacgcggcgacactcatttagcaattgatcgattgattttgggaattcttgaggat
tctcaaattgcagacttgttgacagaatctggtgtggctgcttctagggttaaattagag
gttgaaaatcttcgcagtaaagaagggacgaaagttgagagtgcttatagtgacagtaaa
tttgaagcgttgaaaacttatggtagagacttggtcgaacaagcagggaaacttgatcct
gttattggacgcgatgaagagataagaagggttgtgaggattttatcaagaaggacaaag
aacaatcctgttattataggtgagccaggtgttggtaaaacagctgttgttgaagggctg
gctaagagaatagttagaggagatgttcctagcaatcttgctgatgttaggttatttgct
ttggatatgggagcgttagtcgctggtactcagtataggggacaatttgaacaaaggttg
aaggcagttttgaaagaagtggaagatgctgaagggaaggttattgttttcattgatgaa
attcatcttgttctcggtgccggtcaatgtcaaggatcaatggatgctgctaatcttttg
aaacctatgcttgctcgtggccaacttagatgcatcggtgcaacaacacttgatgaatat
agaaaatatgttgaaaaggatgcagcatttgaaaggaggtttcaacaggttcatgtttct
gaacctagtgtgcctgataccattagtattcttcgtggactaaaagagaaatacgagggt
catcatggtgttcgaattcaagaccgtgcaattgttgttgcagctcagatgtctagtcgg
tacataactgggcgtcgtcttcctgataaggcaattgatttagttgacgaggcttgtgca
aatgttagagttcaacttgacagtcagccagaggaaattgacaaccttgaaaggaagaga
atgcaactggaagtggaacttcatgctttggagaaagaggaggacaaagctagcaaagct
cgtcttgtcgatgtgcggaaagaacttgacaatttaagagacaagcttcagcctctgaag
atgaagtatatcaaagagaaagagaggattgatgagattcgaagtctgaaacagaaacgt
gaagagctcctctttgcactacaagaggctgagaggcggtatgatctagccagagctgca
gacctacgatatggtgcaattgaagaggtggaaaatgcaataaaaaatcttgaaggtagc
actgatgggaacaaaggtgagaacttgatgctgacagaaactgttggaccagatcaaatt
gctgaggttgttagccgatggaccggtataccagtgactcgtttaggccaaaatgataaa
gaaaggttggttggacttggagacagattgcatactagagttgtgggacaagaccaagca
gttaaagctgtcgctggggctgtagtaaggtcgagagctggtctaggaagaccacaacaa
ccaactggttccttcctattccttggtccaactggtgtcggtaaaacagaacttgctaag
gctcttgctcaacaactctttgataatgaaaatcagatggttagacttgacatgtcggaa
tacatggagaaatactccgtatcaagattgattggtgcaccaccagggtatgttgggcat
gacgaaggcggacaattaactgaagctgtaaggagaaggccttacagtctagtacttttt
gatgaagtagagaaagcacatacatctgtattcaacactctgcttcaagtcctagatgac
ggaagattaactgatggccaaggaagaactgtggattttaggaacacagtcattatcatg
acctcaaacctcggcgccgatcatctcataagtggactttcaggaaattgtaccatgcaa
gttgctcgcgaccgagtaatgctggaagtaaaaaagcatttccggccagaattgttgaat
aggctagacgaagttgttgtattcgatccactatctcacgagcaattgaggaaggttgca
aggttgcaaatgaaggatgttgctagtcgtcttgccgagagaggaattgcattggcagtt
actgatccagcactagattatatacttgctgaaagctatgatcccgtgtacggtgctaga
ccaatttggtggcttgagaagaatgtggtgacagagctatctatgatgcttataagggaa
gaaattgatgagaatacaactgtttgcattgatgctggtcctaagggaagtgatttggta
taccgtgtcgaaaagaatggagggattgtaaatgctgaaactggggtgaagtcagatatt
ttgattcagataccaaatggaccaaaaattgtcggtgaaaatggatatgaggtcattggc
gatgatgaaatggaagagtaa
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