Medicago truncatula (barrel medic): 25498012
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Entry
25498012 CDS
T01716
Name
(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1 isoform X1
KO
K10742
DNA replication ATP-dependent helicase/nuclease Dna2 [EC:
5.6.2.3
3.1.-.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
25498012
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtr03032
]
25498012
Enzymes [BR:
mtr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
25498012
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
25498012
Prokaryotic type
Elongation factors (archaeal)
Other elongation factors
25498012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dna2
AAA_12
AAA_11
AAA_30
AAA_19
Cas_Cas4
UvrD-helicase
ResIII
nSTAND3
bpMoxR
SMUBP-2_HCS1_1B
Motif
Other DBs
NCBI-GeneID:
25498012
NCBI-ProteinID:
XP_013448201
UniProt:
A0A072TZB7
LinkDB
All DBs
Position
7:13330023..13347849
Genome browser
AA seq
1335 aa
AA seq
DB search
MPPKKKPNNSSSSFSSSKKPNPQPSKYGIQHFFDRHTTQQQNSQKLQSNNSNATSQVADA
ASDSRPPPEKSTDAVNEADTLSEVSPEMSKTMSRKRFKFSPGMFIKQSQDDGADEVTWKI
SPVNERLQAVSKRMPKIIQALAESSRANMLQIRRCSEDKTSLDKGDKADELLITSTPNAS
TKAPLSLSKLGLKKLNPDRGVDCNGNPTTLSNSSVAVGRNPFRTPPSLSCRELAKDDEHN
GPSDQPFLRQHKKALLELLDQVEDAIGVDNDTVCDKTTHSCNSQDGIADGLPVRANHLVE
RTKSHIPKEVVSVFSDSSYLVLEVSEKSQPAAKGPYKVLRLLNEQSGEERAVNLWDEWSY
SVVAPGNTVNIIGEFDEGGSCDINHDNNFLIVHPDILVSGTRVASSFTCPRRTVLDERLK
CNEYSTAALCGTLLHQIFQAGLTNDNPTIDFLESYTEVVLQRNVESLFACGVNEKDVHKT
MIDAIPRIYNWIMLFRNMEEREDPNVNFGSVNGMKNIGISEVIDIEEMAWAPKYGLKGMI
DASVRVKVHSRKDRPEGKIMPVEFKTGKSPSGQTSVEHNAQVILYTLLMSERYKKTIDSG
LLYYLQTDQTQGITVQRSDLVGLIIRRNELASEILKALVLQQLPPVLQSTSMCRGCRHLN
VCSIYHKAHGGSVENNGLGDIFDSNTNHLRSSHSKFLCHWDHLIDLEAKGTEFIKKDVWR
SYNLRSRSAGGVSSIVIDASQGIPYSTSHEDNRFIYRFVPQDNSYPSIVSDDDPSSASLK
NDLDLTLRSGDYVILSNESSHQTIAKGVISDISHNHISVSFSKLLRIPGRSSTEHDLLQQ
VWRIDKDEAVTSFAIMRFNLVQLFLQDDQSGHLRRMIVDLEAPRFDGSSIVSHDPAISYV
WSEQSLNDDQRRAILKILVAKDYALILGMPGTGKTSTMVHAVKALLIRGTSILLTAYTNS
AVDNLLIKLKAQGIDFVRVGRHEAVHEEVRGHCLSETNVKSVEDIKIRLEQVKVVAVTCL
GISSPLLANRRFDVCIMDEAGQTTLPVSLGPLRFASTFVLVGDHYQLPPLVHSTEARENG
MGMSLFCRLSEAHPQAISALQSQYRMCQGIMDLSNALIYGDRLRCGTSEIANAKLEFSGL
NCSLPWLENVLNPRRPVIFIDTDMLPALEERDHKIVNNPIEAHIIAEVAKELVKNGIGGE
NIGIITPYNSQANLIRHATCITSLEIHTIDKYQGRDKDCILVSFVRSCENPTSCVASLLG
DWHRINVALTRAKRKLIMVGSRKTLLKVPLLKLLIKKVEEQSGILNVSKKDIYSKGELIR
CSQISCSEQTLDVPK
NT seq
4008 nt
NT seq
+upstream
nt +downstream
nt
atgcctccaaagaagaaacctaacaattcatcatcatcattttcatcttcaaagaaaccc
aatccacaaccatccaaatacggtattcaacacttcttcgatcgccacacaactcaacaa
caaaactctcagaaacttcaatccaacaattcaaatgcaacatctcaagttgctgatgct
gcttccgattctcgaccaccgccggaaaaatctaccgatgctgttaatgaggctgatacg
ttatctgaggtgtctccagagatgtcgaagactatgtcgcggaaacggtttaaattctcg
cctggaatgttcatcaagcagagtcaggatgatggggccgatgaggttacatggaagata
tctccagtgaatgaaaggcttcaagcagtttcaaaacgcatgcctaagataattcaagca
ttggctgaatcttcgagggccaacatgttgcaaattcgccgctgctcagaagataagact
tctctggataaaggtgataaggctgacgagttgcttattacatcaactcccaatgcatct
acaaaagctccgttgtcattgagtaaattaggcctgaaaaaattgaaccctgaccgaggt
gtggactgtaatggcaatccaactactctgagcaactcttcagtggctgttggaagaaat
cccttcagaacaccaccatctttgtcttgtcgcgagcttgccaaggatgatgagcacaac
ggaccatctgaccagccttttttgaggcagcacaaaaaggcattgcttgaacttttagat
caagtcgaagatgcaattggtgttgataatgatacagtttgtgataaaaccactcattcc
tgtaattcacaagatggaattgctgacgggctacctgtcagagccaaccatctagttgaa
aggactaaatcacatatacctaaagaggttgttagtgttttctccgattctagttatttg
gttttggaggtatctgaaaaatcgcaacctgctgctaaaggcccatacaaggtgcttcgt
ttactaaatgaacaaagtggagaagagcgagctgtaaacttgtgggatgaatggtcttac
agtgtagtcgcacctggaaatactgtgaacataattggtgaatttgacgaagggggcagt
tgtgatattaatcatgataataattttttgattgtacacccggatattcttgtgtctgga
acacgggtcgcttccagttttacttgcccaaggagaactgtcttagatgaaaggctaaaa
tgcaatgagtactcaactgcagctttatgtggaaccttgcttcaccaaatttttcaggct
gggcttacaaatgacaatcctacaatagacttcttggagtcttacacagaagtggtttta
caaagaaatgttgaaagtttatttgcatgtggagtaaatgaaaaggatgttcacaaaacc
atgattgatgctatccctagaatatacaattggatcatgctgttcagaaatatggaggaa
agagaagatcctaacgttaattttggaagtgttaatggaatgaagaatattggcatatct
gaggtaattgatattgaagaaatggcatgggcaccaaaatatggtttaaaagggatgatt
gatgcttcggttagagtgaaggttcattctagaaaagatcgaccagaggggaagatcatg
ccagtagagttcaaaactggaaaatcacctagtggccagacatcagtagaacataatgcc
caagtaattctgtacactctcctgatgtctgaaaggtacaagaagaccattgattctggt
cttctgtattatctccaaacagatcagacacagggaattacggttcaaagatctgactta
gttgggttaataatacggcgtaatgagcttgcaagtgagattctcaaagcattagtcttg
caacaacttccaccagtgttacagagtactagcatgtgcagaggttgtcgacatcttaat
gtctgtagcatttatcataaggcacatggtggaagcgtcgagaacaatggattgggagat
atttttgattccaatactaatcacttaagatcatctcattctaagttcctctgccattgg
gatcatttgattgacttggaagcgaaagggactgagttcataaagaaagacgtgtggcgt
tcatataatttgaggagtcgcagcgccggtggtgtttcttctattgttattgatgcttca
caaggaataccttattcaacatctcacgaagataatcgtttcatttatcgttttgtacca
caagataattcttatccctctatagtttctgatgatgatccttctagtgcctctttgaaa
aatgatttggatctcacactgagaagtggtgactatgtgatattgagtaatgaatcgagc
catcaaactattgcaaaaggggtgatttcagatattagtcacaatcatatatctgtttcc
ttttccaagctcttgagaattcctgggaggtcttccacggaacatgatctccttcagcag
gtttggagaatcgacaaggatgaagctgtgacttcatttgcaattatgaggtttaatctt
gtacaactttttctacaagatgatcaaagtggtcatctccggaggatgattgttgacctt
gaggctcctagatttgacggtagctctatagttagccatgatccagcaatatcttacgtt
tggtctgagcagagtttgaatgatgatcaacgtagagcaattctcaagatacttgtggca
aaagattatgcacttatattagggatgcctggaacgggaaagacatccaccatggtccat
gctgtgaaagccttattgattagagggacatccattttactaacagcctatacaaattct
gctgttgataatttactaatcaagttaaaagcacagggcattgattttgtacgtgttgga
agacatgaagcagtacatgaagaggttagagggcactgcctctcagaaacaaacgtaaag
agtgttgaagatatcaaaataaggttagaacaagtcaaagttgttgcagttacttgtttg
ggcatttccagtcccctgcttgccaataggagatttgatgtatgcattatggatgaagct
gggcagaccactctgccggtgtccttgggccctctaagatttgcttcaacgtttgttctt
gtgggggatcattatcaactgccaccacttgtccatagtacagaggcccgagagaatggc
atggggatgagtttattttgtaggctttcagaagctcatccacaggcaatttcagcttta
cagagtcagtaccgtatgtgtcagggtattatggacttgtcaaatgccttgatatatggt
gacagactgaggtgtggtacatctgagatagctaatgccaaacttgagttttctggctta
aactgcagtttgccttggctagaaaatgttttgaatcccagaaggccagtgatatttata
gatactgatatgctgcctgccttagaggaaagggatcacaaaattgtaaataaccctatt
gaagctcacataatcgctgaggttgcaaaggaattggtaaaaaatggaattggaggagag
aacattggcattattactccctataattcacaggcaaacctcatacgacatgctacttgc
ataacatccttagagatacataccattgacaaataccagggtagagataaagactgcata
ttagtatcttttgtacgttcttgtgagaacccaacaagctgtgtcgcttctctgctggga
gactggcacaggataaatgtggctcttactcgtgctaagagaaagttgataatggtgggg
tctcgtaaaactctattgaaggttccattactgaagcttctgataaagaaagttgaggag
caatctggaattttaaatgtatctaagaaggatatctatagtaaaggagagctgattaga
tgctctcaaatttcatgttcagaacaaacattagatgttcctaaatga
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