Medicago truncatula (barrel medic): 25498016
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Entry
25498016 CDS
T01716
Name
(RefSeq) cyclic nucleotide-gated ion channel 18
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
25498016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
25498016
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
25498016
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Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
25498016
NCBI-ProteinID:
XP_013448207
UniProt:
A0A072TXK5
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Position
7:complement(13368847..13372634)
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AA seq
682 aa
AA seq
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MYRIISTPASKFRQFRRLGSKPTITSSTEEEEQASHILLWRYQILDPDSELVAYWNKVFL
VTSLLALFIDPLYFFLPTVGGPACLSVDPKLSIVITFLRTFADLFYVLHMVMKFRTAFVA
PNSRIIGRGDLVMDPYQIAMRYLKSDFVIDLAATIPLPQIVVWLVIPASRGTKSDHANNN
LALFVLIQYVPRLFLIFPLNARIQKTTGVIAKTPWIGAAYNLVLYMLASHVTGATWYLSS
IGRQFNCWKTQCEQENKSHTLSCLPSFLDCNSMDSPDRQYWINLTNITSKCDAKSKVNIK
YKFGMFADAFLNDVVTTSFKERYFYCLWWGLRNLSSYGQNLDTTTYLWETLFCIVLCIAG
LVLFSLLIGNMQTYLQSMTVRLDEWRIRKRDTEEWMRHRQLPPDLQERVRRFVQYKWLAT
RGVDEEGIMLSLPLDLRREIQHHLCLSLVRRVPFFSQMDDQLLDAICERLVSSLSTQGTY
IFQEDDPVDEMLFIIRGTLESSTTNGGRYGFFNSITLRPGDFCGEELLTWALLPNSTLNL
PSSTRTVKALTEVEAFALQAEDLKFVASQFKRLHSKKLQHAFRYYSHQWRTWSSCFIQAA
WRKHQKRKATRELSIKEGLYYMVDPEIEETSRSGKSFNNFGATVLASRFAANTKKGNDKI
QESDPVPQLFKPHEPNFSDDHV
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atgtatagaataatatccacgccggcatccaagttccgccaattccggcgactcggttct
aaaccaaccatcacctcctccactgaagaagaagaacaagcttcacatattctactatgg
cggtaccagatcctggacccggacagcgagttggttgcatattggaacaaagtcttcctt
gttacgagtctcctcgcattgttcatagatcctctttatttcttcctaccgacggttggc
ggacccgcttgcttgtcggtggatcctaaactaagcatcgtcataacctttcttagaacg
tttgcggatttgttttatgttcttcatatggttatgaagtttcggacggcttttgttgct
cctaattcgaggattattggtcgcggtgaccttgttatggatccttatcagattgctatg
cggtatttgaagtctgattttgttattgatcttgctgctaccattccattgccccagatt
gttgtttggttagtaattccagcgagtagaggcacaaaaagtgatcatgccaacaacaat
cttgcactttttgttcttattcagtatgttcctaggctctttctcatctttcctttgaat
gctcgtattcaaaaaacaactggtgttatagcaaagactccctggattggtgctgcatac
aatcttgttctctacatgctagctagccatgttacaggagcaacttggtacctatcatca
ataggaagacaattcaattgctggaaaacgcaatgcgaacaggaaaataaatcgcatacc
ctctcttgcttgcctagttttcttgactgtaatagtatggatagccctgatagacaatac
tggataaacctcacaaatattactagcaagtgtgatgcaaagagcaaggtcaacatcaaa
tacaagtttgggatgtttgcagatgcttttctcaatgatgttgtcactactagttttaag
gaaagatatttctattgtctttggtggggtttaagaaatttaagttcttatggacaaaat
ttggacaccaccacatacctttgggagacacttttttgcatcgtcttatgcattgctgga
ttagttctcttttcacttttgattggaaacatgcagacatacttgcaatcgatgacggtt
agactagatgaatggaggattcggaaaagagatacagaagagtggatgaggcatcgacag
ttacctccagatttgcaggagcgtgtccgtcgctttgttcaatataaatggctagcaaca
agaggagtagatgaggagggcataatgctttccttacctttggatcttcgccgtgaaatt
cagcatcacttgtgtctctctctagtgcgacgtgtgcctttcttctcacaaatggatgat
caactacttgatgcaatatgtgaacgccttgtatcatcactaagcacacaaggcacatat
atatttcaagaggacgatccggtagatgaaatgttgtttatcattagaggaacattggag
agttctacaacaaatggaggaaggtatggattcttcaattcaatcacactaaggccagga
gacttttgtggagaagaattgttaacatgggcattattaccaaactcaactctcaattta
ccttcctctactcgtaccgtaaaagctcttactgaagtagaagcttttgcgctacaagcg
gaggatctaaaatttgtggcgagtcagttcaagcgtcttcacagcaagaaacttcagcat
gcttttagatattattcacatcaatggagaacatggagttcttgtttcatacaagcagca
tggagaaagcatcagaaaagaaaggcaacaagagagttgtcaattaaagaaggactttat
tacatggttgatcctgagattgaagaaacatcaaggagtggtaaaagttttaataatttt
ggtgctactgttttggcttcaagatttgctgcaaatacaaagaaagggaatgataagatt
caagaaagtgaccctgtgccacagttgtttaaacctcatgaacctaatttctctgatgat
catgtttag
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