Medicago truncatula (barrel medic): 25498084
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Entry
25498084 CDS
T01716
Name
(RefSeq) probable helicase CHR10
KO
K20092
chromodomain-helicase-DNA-binding protein 1-like [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mtr03036
]
25498084
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
25498084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
Motif
Other DBs
NCBI-GeneID:
25498084
NCBI-ProteinID:
XP_039683843
LinkDB
All DBs
Position
7:21181888..21189649
Genome browser
AA seq
903 aa
AA seq
DB search
MNLKYEQRLQVAAKIILDDDESSGDAAPSEEELGIKATLKPHQVDGISWLIRRYKLGVNV
VLGDEMGLGKTLQAISFLSYLKVRQLSHGPFLVICPLSVTDGWVSEIVKYAPKLEVFKYV
GDKEYRRSLRRKTHEHVTKQPTHNVMLPFDVLLTSYDIALMDKDFLSQIPWQYAVIDEAQ
RLKNPSSVLFNVLKDRYIMPRRLLMTGTPIQNNLSELWALMHFCMPSVFGTLDQFLSTFK
DISDLTSGEGCPNFINTTHAISLGNVGLNPPLHSQHNEDFGGGNEGIPNSAIRWLGADRN
EVGISNNPSCSGPMSSERGLCLYPNIRSRIGSNIILKLWNFKQLVLVYGTSNHQSLQNTV
IQLRKACSHPYLFPGIEPEPYEEGEHLVQASGKLLILDQLLRKLHHNGHRVLLFAQMTHT
LDILQDYLELRKYSYERLDGSIRAEERFAAIRSFSNSSANTGLNFEANQNGAFVFMISTR
AGGVGLNLVAADTVIFYEQDWNPQVDRQALQRAHRIGQMNHVLCINLVTEHTVEEVIMRR
AERKLQLSLNVTGDNIVEQEDKQLSSVGTGDLKSIIVGLRMFDPNEINDGKDKDMDLTEI
NAMADKVIAIRDEQIFDKDDRKFEVNPRNFLKGFDVKERGSASFSCDLDLDEASYLAWVK
KFEEVSKSSCDSVIDLKSRRNLDEEKSQKLETARKKAEEKKLSKWNAAGYQSLNVEDPIS
PPDGDTILDAGSVHFVYGDCTAPTNVPSTEPVLIFSCVDTSGRWGHGGMFDALSKLSSSI
SDAYERAYEHGDLHLGDLHLIRLEDDGNDQNLDGNAPKMVALAVVQSYNPRRKVPRSEIS
LVHLESCLSKAAFSADQNSASIHMPRIGYQDGSDRSQWYTIERLLRKYASMYNVNIYVYY
YRR
NT seq
2712 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgaaatacgaacagaggctccaagtcgccgctaaaataatactcgacgacgac
gaaagttccggcgacgcagcgccgagtgaagaagagcttgggattaaagcaacactgaaa
cctcatcaagtggatggaatttcatggcttataaggagatataaacttggtgtcaacgtt
gttcttggggatgagatgggattgggcaagacattgcaagctatctcatttttaagctat
ttgaaagtgcgccagttgtcacacgggccatttttggttatatgtcctttaagtgtgaca
gatggttgggtgtctgagatagtcaaatatgcccctaaactagaagtcttcaaatatgtt
ggtgataaagaatataggcgcagtctacgtaggaaaacacatgaacatgtaacaaagcag
ccaacacataatgtcatgttgccattcgatgtgctgttaacatcatatgacattgcacta
atggataaggattttctttctcaaataccatggcagtatgcagtcatcgatgaagcgcaa
aggcttaaaaacccgtcaagtgttttatttaatgttctcaaagatcgctatatcatgcca
agacggttgttgatgactggcactcctattcagaacaacctttctgaactgtgggcgttg
atgcatttttgcatgccatctgtttttgggacactagatcagtttctttctacatttaag
gacatcagtgatcttacctcaggtgagggctgcccaaactttataaacactacacatgcc
atatctctaggcaacgtggggctaaatccaccccttcacagtcaacacaatgaagatttt
ggaggtggaaatgaaggcattcctaattccgcaattaggtggctgggggcggatcgcaat
gaagttggaatttctaacaacccttcgtgctcgggtccaatgagctcggagcgtggatta
tgcctgtaccccaacatcagatctaggataggctctaatatcatcttaaaattgtggaat
ttcaaacagttagtattagtttatggaacatcaaatcaccaatcactacagaatactgtg
atacaactaaggaaagcatgcagccatccttatctttttccgggtattgaacctgaacct
tatgaagaaggtgaacatctggttcaggccagtggtaaactgctgattctggaccaactt
cttcgaaagctacatcataatggacatcgtgttcttctttttgctcagatgacacataca
cttgacattttgcaggattatctggagttacgtaagtattcttacgagcgtcttgatgga
tcaattagggctgaggagcgctttgctgcaataagaagtttcagcaactcatcagctaat
acgggcttgaattttgaagctaaccaaaacggagcttttgtttttatgatctcaacaaga
gctgggggagttggcttgaatctcgtggctgctgatactgttatattctatgagcaagat
tggaaccctcaggtggacagacaagctttgcagagagcacatagaattggccagatgaat
catgttttgtgtataaaccttgttactgaacatacagtggaggaagtaattatgcggagg
gcagaaagaaaattgcagctgagcctaaatgttacaggcgataatattgtggaacaagaa
gataaacaattatcttcagttggaactggtgatttgaaatccatcatagttggattacgt
atgtttgatcccaatgaaatcaatgatggaaaagacaaggacatggatttaacagaaatt
aatgcaatggctgacaaagtgattgctattcgtgatgaacaaatatttgataaggatgac
aggaaatttgaggtcaatccaagaaactttttaaaaggatttgatgttaaggaaagaggt
tctgcttctttctcttgtgatcttgatcttgatgaggcatcatatcttgcttgggttaaa
aaatttgaggaagtttctaaatcaagttgcgactcagttattgacttgaaaagcagaagg
aacttggatgaggaaaagagtcaaaaacttgagactgcaaggaagaaggcagaagaaaag
aagctgtctaagtggaatgctgctggataccagtcgttgaatgttgaagaccctattagc
cccccagatggggataccatattagatgctggttctgttcattttgtctatggagattgt
acagcccctacaaacgttccttcaactgaacctgttttaatattcagctgtgttgacacc
tccggacgttggggccatggtggaatgtttgatgcactatctaaactttcatcaagcatc
agtgatgcatatgaacgggcttatgaacatggggatttgcatcttggtgatctccatctt
ataaggcttgaagatgacggtaatgatcaaaatttggacggtaatgctcccaaaatggtt
gctttagctgtggttcaatcctacaatccaaggcgtaaagtccctcgaagtgaaatctca
cttgtccacttggaaagctgcttatcaaaggcagcgttctcagctgatcaaaattctgca
tcaatacacatgccacggattggttatcaagatggatctgatcgctctcaatggtacacc
atagaacggcttctaagaaaatatgcctccatgtacaacgtaaatatatatgtgtattat
taccgaagataa
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