Medicago truncatula (barrel medic): 25498158
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Entry
25498158 CDS
T01716
Name
(RefSeq) SNF2 domain-containing protein CLASSY 3-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
25498158
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25498158
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
25498158
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Helicase_C_2
nSTAND3
Motif
Other DBs
NCBI-GeneID:
25498158
NCBI-ProteinID:
XP_013448426
UniProt:
A0A072U020
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All DBs
Position
7:complement(23292265..23296375)
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AA seq
1037 aa
AA seq
DB search
MEELAREANNKHSESSYVDVDVDVDDGEEEEEEEEEEDKGEDLSKIWEEFSNGLLEMVRE
VEDQKCVISETNNVEVNIENSPSSVCNDVSEHADHSNLITFEKKDYFDPVKGCSSSKGNG
ESKKRESKSVGIKMQNVSNKYDFQFVADQPISFVHSKVHKGESNNANAKAKSKDDAKVYE
NVNVNVGDSDEGKQKHVKGLGVGGVSSPQAKQEKMRDSDKPKMTENKGGDCKSRFRIRNG
EKKESMNNNGLTKMFVPKELCLAKLLAECFWGNKNTMKKDSIVLEVKDGNDDWRDRDTRS
PPVCVETPPQIWSLKKVEEVQKTKEELEQEPLWDQMDTALRESEAESMIGNLGTNDMRNP
STLCEHDTCFDDQIGVYCRWCGVVVTEIKYVSQLVMDRFPSEGSGKRASFDDSVNVSHFD
GSQFNVSDGEPETNFSHNEGTVWDLIPDDVKETLYPHQLEGFEFIWKNLTGHIDLHKLSK
TNPRREGGCIISHAPGTGKTRLTIMFLMSYLKVFPKCLPVIVAPASLLLTWEDEFKKWDI
GVPFHNLNNLKLSGKEHDDAVDFVNWSNKRLSKDTTRMVKLISWYKEKSILGISYNLYEK
LAGEGGSKRRKKRKHTNVEKRKQNGDMRNALLESPGLLVLDEGHIPRNERSLIWKVLSKI
QTRKRIILSGTPFQNNFLELYNILSLVKPSFPNTIPHELKKFCLKQEYKKVSEEWSWEAD
YGNSTCNPSDHKIKQLKLLMDPFVHVHKGAILQKKLPGIRNCKLTLKPDSLQKQILDSIQ
SRQNALIFERKLTMASIHPYLFLECDLLKEEESVVDKDQLEKLRLNPYVGVKTKFLVEFV
RLCDAVKEKVLVFSQLIRPLCLIIDQLSHISLNWTVGKEILFMHGEVSLKDRQSLIHSFN
DANSQAKILLASTNACSEGISLVGASRVVLLDVVWNPSVDRQAISRAYRIGQKKVVYTYH
LLTEGTAEKIKHRKQAEKHRLSELVFSAKNADKDKSKSCAVNFEDRILDQLKQHETFKDV
FVTVQSKERDLVESFGS
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atggaggagttagcgagagaggcgaacaataaacacagtgaatcctcttatgttgatgtt
gatgttgatgttgatgatggtgaggaggaggaggaggaggaggaggaggaggacaaaggg
gaggatttgagtaagatttgggaagaattttccaatgggttactggagatggtgagagag
gtggaggatcaaaaatgtgtaatttctgagacgaataatgtggaggtaaacattgaaaat
agtccttcttctgtttgcaatgatgtatcagaacatgcagatcattccaatttaataacc
tttgagaaaaaggattattttgatccagtgaagggttgttcttcttccaaagggaatgga
gaatcgaagaaacgtgaatcaaagagtgtaggcataaaaatgcaaaatgtcagtaataaa
tatgattttcaatttgttgctgatcaacctataagttttgttcattctaaggttcacaag
ggtgagtcaaataatgccaatgccaaagcaaaatccaaagatgatgctaaagtttatgag
aatgtgaatgtgaatgttggtgattctgatgaaggaaaacagaaacatgtcaaaggttta
ggtgttggaggagtttcttcccctcaagcaaaacaagaaaagatgagggattcagataaa
ccaaaaatgacagagaataaagggggggactgtaaaagcagatttaggatccgtaatggt
gagaagaaggaatctatgaacaacaatggtttgactaaaatgtttgtgccgaaggagctg
tgtttagctaaactccttgcagaatgcttttggggcaacaagaatacaatgaagaaggat
tcaattgtgttggaggtgaaggatggcaacgatgattggcgagatagagatacacggtca
ccgccggtttgtgttgagacacctccacagatatggagccttaaaaaggtggaagaagtg
caaaagaccaaagaggagttggagcaggaaccgttatgggatcaaatggatacagccctt
agagaatcagaagctgaatccatgattggaaatttagggacaaatgacatgagaaatcca
tccactctttgtgaacacgacacttgtttcgacgatcagattggtgtatattgcagatgg
tgtggtgtggttgtcactgagatcaaatatgtctcacaactggtgatggatagatttccc
tctgaaggttctggaaaaagggcttcatttgatgattcagtaaatgtctcacactttgat
ggctctcagttcaatgtttctgatggtgaaccagagactaatttctctcataatgaaggc
actgtttgggacctaattcctgatgatgtgaaagaaaccttgtatcctcatcaactagaa
ggctttgagttcatttggaaaaacttgacaggacacatcgatcttcacaagttaagtaaa
accaatcctcgcagggagggtggctgcattatctcccatgctcccggaaccggaaagaca
aggttgactataatgtttctcatgtcatatctgaaagtgtttcctaaatgcttgccggtt
attgttgctcctgcgagtttgttacttacttgggaagatgagttcaaaaaatgggacatt
ggagttccatttcacaatttgaacaatctcaaattatccggtaaagagcatgatgatgct
gttgattttgttaattggtctaataagcggcttagtaaggatacaacacggatggtgaaa
ctgatttcttggtacaaagaaaagagcattctgggaatcagttacaatttgtacgagaag
ctagccggagaagggggatccaaacgcaggaaaaagagaaaacatacaaatgtggagaag
aggaaacaaaatggcgatatgagaaacgctttacttgaatctcctggtttgttagtgcta
gatgaaggacacataccgagaaatgaaagaagtcttatttggaaggtattgtcgaaaatt
caaacccgcaagcggatcatcctttctggaactcctttccagaacaatttcttggaactg
tacaacattttgagcctagtgaagccttcgtttcctaacacgataccgcatgagctgaaa
aagttttgcctgaagcaggaatataaaaaagtatctgaagaatggagttgggaagccgat
tatggcaactcaacctgtaatccttccgaccataagatcaaacagttaaaattgcttatg
gatccatttgttcatgttcataaaggtgcgatccttcaaaagaagctccctgggataaga
aattgtaagctgactttgaagccggacagtttgcagaagcaaattcttgacagcattcaa
agtcgtcagaacgcgttgatctttgagcgtaagctgacaatggcatcaatccatccgtat
cttttcctcgaatgcgatcttttgaaagaagaggaatctgttgtcgacaaggaccagcta
gaaaagcttcgattgaatccatatgtaggtgtgaaaaccaaatttctggttgagtttgtt
agactttgtgatgctgttaaagagaaagttcttgtgttcagccaattaatccgtccctta
tgcttaatcatagaccaattatcgcacatttctttaaactggacagtggggaaggaaatc
ctcttcatgcatggagaggttagtctaaaggacagacaatccttaatccatagcttcaat
gatgctaacagccaagcaaagatcctccttgcatcgacaaatgcttgttccgagggaatt
agcttagtcggagcatcaagggttgtgctgctcgatgttgtatggaatccatcagtcgat
cgacaggctatcagtagagcatataggattggccaaaagaaggttgtatacacttaccat
ctgctcaccgaagggactgctgagaaaataaaacatcgcaaacaggccgaaaagcacagg
ttatctgaactggttttttcggctaaaaatgctgataaagataagtccaagagttgtgct
gttaactttgaagatagaattcttgatcagttgaaacagcacgaaacgttcaaagacgtg
tttgttacagttcagtcaaaggagcgagatttggttgagagtttcggctcttga
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