Medicago truncatula (barrel medic): 25498742
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Entry
25498742 CDS
T01716
Name
(RefSeq) LIMR family protein At5g01460
KO
K14617
LMBR1 domain-containing protein 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04977
Vitamin digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
25498742
04980 Cobalamin transport and metabolism
25498742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25498742
Membrane trafficking [BR:
mtr04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
25498742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LMBR1
Uso1_p115_C
DUF7801
CCSMST1
Motif
Other DBs
NCBI-GeneID:
25498742
NCBI-ProteinID:
XP_013449132
UniProt:
A0A072U057
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Position
7:31860943..31866273
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AA seq
509 aa
AA seq
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MGDFNLALVIVAIVVCVIVFLVNVYLLVNYQHPDDVNQAYFPKFVVVLGLSVAAISILML
PADVANRQACRHAIYNGACNLTLPMKNLWLAVYIIDAILVFFVIPFAMFYYEGDQDKSIG
KRIKSALMWMVSTAVVCALVLGILYGLVGKVDFTVRHLSSSTEAFPGSWGLNSGNPCVGN
GVHQCSAYSASPSSEKTWTMRSTFPEYVVALATIVGSVLFAIFGGVGIACLPLGLIFSFI
RRPKAVITRSQYIKEATELGKKAKELKKAAESLHQEERGGAKGRKHRKNVKAVEKELYQL
EEDVKLLEEMYPQGEKAETSWALTVLGYLAKLVLGILGLIVSVAWIAHIIIYLLINPPLS
PFLNEVFIKLDDIWGLLGTAAFAFFCFYLLLAVIAGATMLGLRLVFITIHPMKWGATLMN
SFLFNVGLILLCSISVIQFCSTSFAYYAQATAAQEIFGHTLQSLRGIKYLYKYNVFQYAF
VILAGLTFVYYAAVGWRRKKPSGRFQLST
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgggcgatttcaacctcgcccttgtgattgtcgccattgttgtatgtgtaatcgtgttt
ctcgtcaatgtgtatcttctcgtgaactatcagcatcctgatgatgttaatcaggcttat
tttcctaaatttgttgttgttttgggattatcggttgctgcgatttcgatattgatgctt
ccggcggatgtagcaaatcggcaagcttgccggcatgctatttataatggcgcgtgtaat
ctcacgctcccgatgaagaatttgtggcttgcggtttatattatcgatgctattcttgtg
ttcttcgttattccttttgcaatgttctattatgaaggagaccaggacaagagtattggt
aaaaggattaagagtgcattgatgtggatggtgtcgactgccgtagtttgtgctcttgtt
ttgggaattttgtatgggcttgttggtaaggtggattttactgttaggcatctctcttca
tcgacagaagcatttcctggctcatggggactcaatagtggtaacccatgtgttggaaat
ggtgtccatcagtgctctgcatactctgctagtccttcatcagagaaaacatggaccatg
cgatcaacttttcctgaatatgttgtggctcttgctactatcgttggatctgtgcttttt
gctatatttggtggtgttggtattgcttgccttccacttggacttatattttcatttatc
cggcggccaaaggctgttatcactcgctcacagtatatcaaggaagcaaccgaacttggt
aaaaaagcaaaagaattaaagaaagcagctgagtcactccatcaggaagaaagaggtggt
gcaaagggtagaaaacatcgtaaaaatgttaaagcagtagaaaaggagttgtatcaatta
gaagaagacgtgaagcttcttgaagagatgtatccacaaggggaaaaggctgagacatca
tgggcactaacagttcttggttatctggcgaaacttgttttgggaattctagggctgatt
gtttcagtagcatggattgctcatattattatctatttattaattaatcctcccctttct
cctttcctgaatgaagttttcatcaagctagatgatatctggggtctgcttggcacagcc
gcgtttgcatttttctgcttctaccttctccttgctgtgattgctggtgccacgatgctt
gggttgagactagtgttcatcaccatacatcccatgaagtggggagcaactctcatgaac
tcttttctgtttaatgtgggccttatccttctttgttccattagtgtgattcagttttgc
tccacgtcatttgcctactatgcacaagcaactgcagcccaggaaatatttggtcacact
ttgcagtctcttcgtggaattaaatatttgtacaagtacaatgtatttcaatatgcattt
gttattttggccggcttgacctttgtgtactatgctgccgttggatggagaagaaaaaag
cctagcggcaggttccaattgtctacatga
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