Medicago truncatula (barrel medic): 25498768
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Entry
25498768 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25498768
KO
K08518
syntaxin-binding protein 5
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25498768
Membrane trafficking [BR:
mtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
25498768
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
25498768
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC4_WD40
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_RIG_2nd
WD40_Prp19
Synaptobrevin
WD40
WDR55
Beta-prop_IFT140_1st
CPSF_A
Motif
Other DBs
NCBI-GeneID:
25498768
NCBI-ProteinID:
XP_013449160
UniProt:
A0A072U0I8
LinkDB
All DBs
Position
7:complement(32082013..32091290)
Genome browser
AA seq
1120 aa
AA seq
DB search
MFAKRLLHKAVQHHYNHKFQQQGSLQSTELDPRIVIHYGIPSSSSVLAFDPIQRLLAIGT
LDGRLKVIGGDNIEGLLISSKQLPYKYLEFLQNQGYLVGVLNDNDIQVWNLESRSLICSL
QWESNITAFSVISGSHFIYVGDEHSLFSVIKFDAEERQLLKSSNHLSAKFLRETAGFPES
SDQPIVGILSQPYSSGNRLLIAFQDGLLILWDVSEAKIVFLGGGKDLQLKDDDGNSTETD
TNLPADILEQNLGDKEISALCWASSDGSILAVGYLDGDILFWNLSSAAPSKGQQTTSSKN
VVRLQLSNAERRIPVIVLQWSSSHRSHNDYIGQLFVYGGDEIGSDEVLTVLTLEWSSGME
SLKCIGRADLTLNGTFADLILLPSIGARGLNSKDDLFVLTNPGQIHYYDNDSLSALMSEQ
NRTSSVSAQEFPVLIPMNNPSLTVAKLIKLPSQLNSSKTLAEVAAVLKTSSTPGSASCSN
WPLTGGVPSHLSMVKGAGIERVYFVGYSNGSVLLCDATHPILSYICYIEGEVNGVKVAGL
NAPVTKLDFFSASLLLAVGNECGLVRVYDLKDCSDRKKFQFVTETKNEVHDAPQGKGPHF
SAVFSLLDSPVQALSFANSGTKLAIGFLSGRVGVCDMKSLSVLFLIDGVPSSSSPITSLV
WKQQACFQSAVNSPRKPETPSGNSHEEILFILSSDGKISVVEGDTGKTVSNRPLHLKEST
AISMYIIDDSITTSEVSNDKQHEEPLKTTAEVRPEEPVQESSSTAVNSSEAEHFSSETAH
SGDIHLDPLVLLCCENSLHLLSAKALIQGNKKPIRKVEHSKSCYWTTILKKDEKFCGILS
LLQTGTFEIRSLPDLELVAESSLLSILRWNYKVNMDKTMCSDDYGQIVLANGSELAFISL
LAGENEFRSLERLPCLHDNVLAAAADAAFSFSSNQKKKQTTVPAILGGIVKGLTGGKTSH
AELTKIQTSNFSHLEHIFFKPSLSDSLPTVVVVSNEKEVELDIDDIQIDEPQTTASTSSP
DVKNKQKDKLQSDKEKLFQGGTNDDVKPRVRTPEEIMAAYRKTGDAASVASQTRNKLMER
QEKLERISQRTADLQNGAENFASLANELVKTMERRKWWQI
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atgtttgctaagagattgttacacaaagctgtgcaacaccattacaaccacaagtttcag
cagcaaggtagtttacaatcaactgaattggatccaagaattgtgattcactatggcatt
ccatcttcttcttcagttctcgcttttgatcccattcagcgacttttggctattgggact
ttggatggaagacttaaggtgattggtggtgataacatcgaaggacttttgatttcttcg
aaacaacttccttacaaatacttggagttcctacaaaaccagggatatttagttggagtc
ttaaatgataatgatatccaggtttggaatcttgaaagtcgtagccttatttgttcttta
caatgggaatccaatattaccgctttctctgtcatcagtggctcacatttcatttatgtc
ggagatgagcatagcctgttttctgtgataaagtttgatgccgaggaaagacaacttttg
aagtcatcaaatcatttgtcagctaaatttctaagggaaaccgccgggtttccggagtct
agcgaccaaccgattgttggaattctttcacaaccttattcttctgggaacagattgttg
attgcatttcaggatggactgctaattctttgggatgtttctgaagctaaaattgtgttc
cttggtggtggaaaggacctccaattgaaagatgatgatgggaactctactgaaaccgac
accaatcttccggctgatattttagaacaaaacctgggagataaagaaataagtgctctt
tgttgggcatcttctgatggctccattctcgctgttggatacttagatggagatatcctg
ttttggaacttgtcgtctgcagcaccttctaaaggccaacaaaccacttcatctaaaaat
gttgttaggctacaactgtccaatgcagaaagaagaatcccggtcattgtcttacaatgg
tccagtagtcacagatctcataatgattatattggtcagttgtttgtgtatggtggcgac
gaaattggatcggatgaagttttgactgttttaactcttgaatggtcatctgggatggaa
tcattaaaatgcattggtcgtgcagaccttacgcttaatggcacttttgcagacttgatt
ttactgccaagtataggagcaaggggtttaaatagcaaagatgatctttttgtactgaca
aaccctggacaaatacactattatgataatgatagcttgtctgcattaatgtctgagcag
aataggacatcctctgtatctgcgcaggagtttccagtgctaatacctatgaataatcca
tctttaactgtagcaaaacttatcaagttgccaagtcaattaaattcatcaaaaactcta
gccgaggtagccgcagttctgaaaactagctcaacacctggttcagcttcttgttcaaat
tggcccttaactgggggtgttcccagccacttgtccatggttaaaggtgctggaattgaa
agagtttattttgtgggctattctaatggatctgtccttttgtgtgatgccacacatcca
atcttgtcttatatttgctacatagaaggagaggttaacggtgtaaaagtggcaggtttg
aatgctccagtgacaaaattggactttttttctgcttccttgcttctggctgtgggcaat
gaatgtggtcttgttcgcgtgtatgatcttaaagactgctctgataggaaaaagttccag
tttgtcacagaaacaaaaaatgaagtccatgacgctccacaaggaaaaggacctcatttt
agtgctgttttttctcttctcgattctccagtacaagcattgtcttttgcaaactctgga
accaaacttgccattggatttttaagtggccgtgttggagtctgcgatatgaaatcgttg
tcggttttgttcttgattgatggtgtacctagctcaagctcaccaattacttcattggtt
tggaaacaacaagcatgttttcaaagtgctgtaaatagtccaaggaaaccagaaacacct
tcaggaaactctcacgaagagatactatttatcttatcgagcgatggaaaaattagtgta
gttgagggtgatactggtaaaacggtctccaatcggccattacatttaaaggaatcaact
gcaatttcaatgtatattatagatgatagcatcacaacctcagaagtatcaaatgacaag
cagcacgaggaacccttgaagactaccgctgaagttcgccctgaagagcctgtgcaagaa
agtagctcgactgcggtaaattcatcagaggctgaacatttctcttcagaaaccgcacac
tctggggatatccatttggatccacttgtcctgctttgctgtgaaaattcattgcacttg
ttgtccgcaaaagcattgatacagggaaataagaaaccgatacgaaaagtggaacattca
aaatcttgctattggactacaattttgaagaaagatgagaaattttgtgggattctatca
ttgcttcagactggaacatttgaaataagatctttaccagatttggaactggtggcggaa
agctctttattgtcgattttacggtggaattataaagtgaacatggataaaaccatgtgt
tccgatgattatggacagattgtgctggctaatggttctgaattggcattcatttcatta
ttagctggagaaaatgaattcaggagtctcgaacgtttgccttgtcttcacgataacgtt
cttgcagccgctgctgatgctgcattttcattctcttcaaatcagaagaaaaagcagaca
actgtgccagcgattctaggcggtattgtcaaagggttgacagggggaaaaacctctcat
gcagaactgacaaaaattcaaacctccaatttcagtcatttggaacatatttttttcaag
ccctctttgtcagattcgcttccaacagtggtagtagtgtccaatgaaaaggaagtggag
cttgatatagatgacattcaaatagatgagcctcaaactacagcttctacttcatctcct
gatgttaaaaataaacagaaagataagttacaaagtgataaggagaaattatttcaaggc
ggaactaatgatgatgtaaagccaagggtcagaacacctgaagaaattatggctgcttac
agaaaaaccggggatgctgcttccgttgcctctcaaacaagaaacaagcttatggagagg
caggaaaaattggagagaataagccaacgcacggcagacctacaaaatggagctgaaaat
tttgcatcattagcaaatgagcttgtcaagaccatggaaaggaggaaatggtggcaaata
tag
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