KEGG   Medicago truncatula (barrel medic): 25499058
Entry
25499058          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25499058
   04120 Ubiquitin mediated proteolysis
    25499058
  09126 Chromosome
   03083 Polycomb repressive complex
    25499058
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25499058
   04121 Ubiquitin system [BR:mtr04121]
    25499058
   03036 Chromosome and associated proteins [BR:mtr03036]
    25499058
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    25499058
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     25499058
   Cul7 complex
     25499058
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     25499058
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     25499058
SSDB
Motif
Pfam: Skp1 Skp1_POZ DarP
Other DBs
NCBI-GeneID: 25499058
NCBI-ProteinID: XP_013449664
UniProt: A0A072U1W2
LinkDB
Position
7:complement(44326722..44327434)
AA seq 159 aa
MSSTTTKMITLKSYDNEIFEVPEAVALESQTIKHMIEDDCADNAIPVQNVTGKILAKVIE
YCKKHVQVASADEKPSESEEYLKNWDADFVKVDKETLFELILAANYLDIKSLLDLTCQSA
ADMMKGKTPEEMREMFNIKNDFSPEEEAAIRAENKWAFE
NT seq 480 nt   +upstreamnt  +downstreamnt
atgtcttcaacaaccacgaagatgatcaccctgaagagttacgacaacgaaatctttgag
gtccccgaggcggtggcgctcgaatcacagacaatcaagcacatgatcgaggacgattgt
gccgacaacgcaatcccagttcagaacgttaccggcaagatattagcgaaggtgattgaa
tactgcaagaagcatgtgcaggtggcgagtgccgatgaaaaaccttcagaatcagaagaa
tatcttaagaattgggatgctgatttcgttaaggttgataaggagacgctttttgaactc
atccttgctgcaaactacttggatatcaagagtctactggatcttacctgccagtctgcg
gcggacatgatgaaagggaagacgcccgaggaaatgcgtgagatgtttaacatcaagaat
gatttcagtccagaggaagaagcagcaattcgtgcagaaaacaaatgggcatttgaatga

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