KEGG   Medicago truncatula (barrel medic): 25499072
Entry
25499072          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1A
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25499072
   04120 Ubiquitin mediated proteolysis
    25499072
  09126 Chromosome
   03083 Polycomb repressive complex
    25499072
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25499072
   04121 Ubiquitin system [BR:mtr04121]
    25499072
   03036 Chromosome and associated proteins [BR:mtr03036]
    25499072
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    25499072
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     25499072
   Cul7 complex
     25499072
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     25499072
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     25499072
SSDB
Motif
Pfam: Skp1_POZ Skp1 BTB
Other DBs
NCBI-GeneID: 25499072
NCBI-ProteinID: XP_024625192
LinkDB
Position
7:complement(44386987..44395928)
AA seq 162 aa
MSNSGNAGSKKMITLKSDDGETFEVSEAVALKSQTIKHIIEDDCADNVIPVPNVTGKILA
KVIEYCKKHVEATSSDEKVSEDDLKNWDADFAKEVDQQTLFQILLAANYLNIKNLLDLCC
QTVADDIKDKKPEEIREIFSVENDFNPEEEAKVRNENAWAFE
NT seq 489 nt   +upstreamnt  +downstreamnt
atgtctaactcgggcaacgccggatcaaagaagatgatcactctcaagagtgacgacggc
gaaacctttgaggtttccgaggcggtggcacttaaatctcagacgatcaagcacataatc
gaggatgattgtgccgacaacgtaatccctgttcctaatgtcactggcaagatattggcg
aaggtgattgaatactgtaagaagcatgtcgaggcgacgagttctgatgaaaaagtttca
gaggatgatcttaagaactgggatgctgatttcgcgaaggaggttgatcagcaaacgctt
ttccaaatcctccttgcagcaaactatttgaatatcaagaacttgttggatctctgctgc
cagactgtggctgacgatatcaaagataagaaaccagaggaaattcgcgagatatttagc
gtcgagaatgatttcaatccggaggaagaagcaaaagttcgaaacgaaaacgcatgggca
tttgagtga

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