KEGG   Medicago truncatula (barrel medic): 25499079
Entry
25499079          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25499079
   04120 Ubiquitin mediated proteolysis
    25499079
  09126 Chromosome
   03083 Polycomb repressive complex
    25499079
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25499079
   04121 Ubiquitin system [BR:mtr04121]
    25499079
   03036 Chromosome and associated proteins [BR:mtr03036]
    25499079
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    25499079
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     25499079
   Cul7 complex
     25499079
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     25499079
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     25499079
SSDB
Motif
Pfam: Skp1_POZ DeoC
Other DBs
NCBI-GeneID: 25499079
NCBI-ProteinID: XP_039683943
LinkDB
Position
7:44425482..44426123
AA seq 197 aa
MSSTTKKITLKSSDCKSFEVSEPVAMESQTIKRMMEENCGNNDILILNVKSKILAMVIEY
CKMHVEADLDSEFVKVNYSDYLTVKAIECSKKLFNEVNEAWGVTGNVLAKGIDYCEKHVD
DAAANASSSDLKVWDAKFVRQIDMDTLCDLMLAANYLNIKGLLDLTCRAAPDQARREKEQ
IFFKFAIALVLFWIFFR
NT seq 594 nt   +upstreamnt  +downstreamnt
atgtcttcaacaaccaagaagatcactctgaagagttccgactgcaaaagcttcgaagtt
tcggagcctgtggctatggaatcgcagacaatcaagcgcatgatggaggagaattgcggc
aacaacgatatccttattctgaacgtgaagagcaagatattggcgatggtgattgaatac
tgtaagatgcatgtcgaggctgatttggattctgaattcgttaaggtcaattattccgat
tatcttacggttaaggctattgagtgctctaagaagctcttcaatgaagtgaatgaggct
tggggagtcacaggtaacgttttggctaagggaattgattactgtgagaagcatgtcgat
gatgcagccgccaacgcgagttccagtgatcttaaagtttgggatgctaaattcgtgagg
cagattgatatggatacgctttgcgatctaatgctggctgcgaattacttgaacatcaag
ggtctgctggatcttacttgccgggctgcaccggatcaggctcgtagggaaaaggaacag
atattttttaaatttgctattgctttggttttgttttggatttttttccggtag

DBGET integrated database retrieval system