KEGG   Medicago truncatula (barrel medic): 25499080
Entry
25499080          CDS       T01716                                 
Name
(RefSeq) SKP1-like protein 1B
  KO
K03094  S-phase kinase-associated protein 1
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03083  Polycomb repressive complex
mtr04120  Ubiquitin mediated proteolysis
mtr04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    25499080
   04120 Ubiquitin mediated proteolysis
    25499080
  09126 Chromosome
   03083 Polycomb repressive complex
    25499080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mtr04131]
    25499080
   04121 Ubiquitin system [BR:mtr04121]
    25499080
   03036 Chromosome and associated proteins [BR:mtr03036]
    25499080
Membrane trafficking [BR:mtr04131]
 Endosome - Lysosome transport
  Acidification regulators
   RAVE complex
    25499080
Ubiquitin system [BR:mtr04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Adaptor protein
     25499080
   Cul7 complex
     25499080
Chromosome and associated proteins [BR:mtr03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.1)
     25499080
  Centromeric chromatin formation proteins
   Kinetochore proteins
    CBF3 complex
     25499080
SSDB
Motif
Pfam: Skp1_POZ Skp1
Other DBs
NCBI-GeneID: 25499080
NCBI-ProteinID: XP_024626823
LinkDB
Position
7:44432371..44433620
AA seq 157 aa
MSSITKKMITLKSSNGETFEVSEAVALQSQTIKGMMEENCGNNGIPILNVKSKILAKVTE
YCKMHVEASKTLAKGIDYCEKQVDADTANSNDLKAWDAKFMKKTDMKTLCDLMLAANYLN
IKGLLDLTCRAVPDLVRGKTLRKWYNKEFVLGEFVLD
NT seq 474 nt   +upstreamnt  +downstreamnt
atgtcttcaataacgaagaagatgatcactttgaagagttccaacggtgaaaccttcgag
gtttccgaggcggtggcacttcaatcgcagacaatcaagggcatgatggaggagaattgt
ggcaacaacggaatccctattcttaacgtgaagagcaagatattggcaaaggtgactgaa
tactgtaagatgcatgtcgaggccagcaagacattggcgaagggaattgattactgtgag
aagcaagttgatgccgacaccgcgaattccaatgatcttaaagcttgggatgctaaattc
atgaagaagactgatatgaaaacgctttgcgatctcatgctggctgcgaattacttgaac
atcaagggtctgctggatcttacctgtcgggctgtaccggatcttgttcgagggaagaca
ttgagaaaatggtacaacaaagagtttgttcttggagaatttgttttagactaa

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