Medicago truncatula (barrel medic): 25499104
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Entry
25499104 CDS
T01716
Name
(RefSeq) small nuclear ribonucleoprotein SmD1b
KO
K11087
small nuclear ribonucleoprotein D1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25499104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25499104
03032 DNA replication proteins [BR:
mtr03032
]
25499104
Spliceosome [BR:
mtr03041
]
Complex A
U1 snRNP components
Sm proteins
25499104
U2 snRNP components
25499104
Complex B
U1 snRNP components
25499104
U4/U6.U5 tri-snRNP components
25499104
Complex C
U2 snRNP components
25499104
DNA replication proteins [BR:
mtr03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
25499104
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
WHD_ArnR1
Gemin7
EBNA2_Core
YomU_Tube
Motif
Other DBs
NCBI-GeneID:
25499104
NCBI-ProteinID:
XP_013449710
UniProt:
I3SQE6
A0A072U3K3
LinkDB
All DBs
Position
7:44641685..44644507
Genome browser
AA seq
115 aa
AA seq
DB search
MKLVRFLMKLNNETVSIELKNGTIVHGTITGVDISMNTHLKTVKLTLKGKNPVTLDHLSV
RGNNIRYYILPDSLNLETLLVEEAPRVKPKKPTAGGKPLGRGRGRGRGRGRGRGR
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcgttagatttctcatgaagttgaacaacgaaaccgtctcaatcgagttgaag
aatggcactattgttcatggcaccattacaggtgttgacatcagtatgaatacacatttg
aaaacagttaagctaactctaaaggggaaaaatccagttactttggatcatctcagtgtg
agaggcaacaacattcgttattatatccttcctgacagcttgaatcttgaaactttactt
gttgaagaagctcctagggtcaagcctaagaagccaactgctggaggaaagcctttgggg
cgaggacgggggcgaggacgtggacgtggacgcggtcgtggccgttaa
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integrated database retrieval system
