Medicago truncatula (barrel medic): 25499138
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Entry
25499138 CDS
T01716
Name
(RefSeq) tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit wdr4
KO
K15443
tRNA (guanine-N(7)-)-methyltransferase subunit TRM82
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mtr03016
]
25499138
Transfer RNA biogenesis [BR:
mtr03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
25499138
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
EIF3I
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_IFT122_1st
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
WD40_RFWD3
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_HPS5
CPSF_A
Beta-prop_WDR19_1st
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
25499138
NCBI-ProteinID:
XP_013449757
UniProt:
A0A072UD69
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Position
7:complement(44935345..44939224)
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AA seq
423 aa
AA seq
DB search
MDEEVAASESRKETTEVAPALIAVHPDGHHVAVAVGPDLRVFNFLSNSAVSLLDESVNQP
FHKDNIRAIRFGAKGKLFVSAGDDKTLKIWSPENWKCISTVLSEKRVTAVAISNDGLYVC
FADKFGLVWIVDLNKNSHDKKPIPLLSHYCSIITSLEFSPDNRYILSADRDFKIRVTNFP
KNPLNGAHEIQSFCLGHTEFVSCLAFVPAQENPHSLLLSGSGDSTVRLWDITSGALLYTC
EVAIKAGLLESNGNAEEHDHAVTDLCTTLDGLLVAVAIQSLQGIVLLSCNVSAQTLSVAK
VVSIAGENFVPTCLANNPSTRELWMVTGVSSLPGYDYPSLSRVLVISGVDVEQEPVVLGD
DKIPGGIKLLETLQGTASFDDNAFLVAAEAVKAAMCNLLIKKQYPFENREYRKKTRNDRK
LKE
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggacgaagaagttgcagcatcagaaagcagaaaagaaaccaccgaagtagcaccggca
ctcatcgccgtccaccctgacggccaccacgtcgccgtcgctgtcggaccggacctccgc
gtcttcaacttcctttccaattctgcagtttccttactcgatgaatccgttaaccaacct
tttcataaagacaatatcagagcaattcgattcggtgcaaaaggaaaactgtttgtatct
gctggtgatgataaaaccctaaaaatctggtcaccggaaaattggaagtgtatttcgacg
gttttgtcggagaagagagttactgctgttgctataagcaatgatggattgtatgtttgt
tttgctgataaatttggacttgtttggattgtggatctcaataaaaattcgcacgataag
aagccgataccgcttctttctcattattgcagtataatcactagcttggaattttcgccg
gataatcggtatattttgagtgctgatagagattttaaaattcgtgttactaattttcct
aagaatccgttaaatggagctcacgagatacagagtttttgtcttggtcatacggagttt
gtttcctgccttgctttcgttccagctcaggaaaaccctcatagtcttcttctatctggc
agtggtgattccacagtacgattgtgggatatcacctcgggtgcactcctatatacttgt
gaagttgcaattaaggcagggcttttagagtccaatggtaatgcagaggagcatgaccat
gctgttactgatttatgtactaccttggatggtttgcttgttgccgtggccattcagagc
ttgcaaggaattgtattgttgagttgcaacgtttctgcacaaacgctttctgttgccaag
gttgtttccattgcaggagagaattttgtccctacctgcctggcaaacaacccctctaca
agggaattgtggatggttacaggtgtctctagtttacctggatatgattacccctctttg
tctcgtgtcctagtaatttctggtgttgatgttgagcaagagccagttgttctgggagat
gataagatacccgggggtataaagctgctagaaacgttacaaggaactgcatcttttgat
gacaatgcttttttggtagcagctgaagctgtcaaagcagcaatgtgtaacctattaata
aagaagcaataccctttcgagaatagagaatatagaaagaaaactagaaatgatagaaaa
ctcaaggaataa
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