Medicago truncatula (barrel medic): 25499528
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Entry
25499528 CDS
T01716
Name
(RefSeq) cell division cycle 20.2, cofactor of APC complex
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
25499528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25499528
03036 Chromosome and associated proteins [BR:
mtr03036
]
25499528
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
25499528
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
25499528
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_TEP1_2nd
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_EML
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_HPS5
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
eIF2A
Beta-prop_SCAP
RMC1_N
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_WDR75_1st
Beta-prop_RIG_1st
Beta-prop_VPS8
Beta-prop_SPT8
CFAP43_N
YajC
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
25499528
NCBI-ProteinID:
XP_013450265
UniProt:
A0A072U570
LinkDB
All DBs
Position
7:complement(50533335..50540280)
Genome browser
AA seq
457 aa
AA seq
DB search
MDSGSWSSSSKTKIRTPFPERFLHRNNSSQDNLDRFIPNRSAMDFDYAHYMMMEGCRKGK
ENPALMSPSRSAYQKRLAEACNMHDRTRILAFKNKPPTPVELFPKELLSPPPLSKSAKPK
RCIPQTSERTLDAPDILDDFYLNLLDWGSSNVVSIALENTVYLWNASDSSTSELVTVDDD
DGPVTSVSWAPDGRHLAIGLNNSHVQLWDTTACKQLRAMKGGHRARVGSLAWNNHILTTG
GMDGKVVNNDVRVRSHIVETYMGHNQEVCGLKWSPSGQQLASGGNDNVVHIWDRSVVSSN
SPTRWLHRFEEHIAAVKALAWCPFQGNLLASGGGGGDHCIKLWNTHTGARLNSVDTGSQV
CALLWNQNERELLSSHGFTENQLTLWKYPSMVKMADLNGHTSRVLYMAQSPDGCTVASAA
ADETLRFWNVFGSPAEACKAAAPKTYNEPFANFTRIR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggattcgggttcgtggagttcttcttcaaagaccaaaatcagaacgcctttcccagaa
cgctttctccaccgaaataattcttctcaggataacttggataggttcataccaaaccga
tcagcgatggattttgattacgctcactacatgatgatggagggttgtagaaaaggaaaa
gagaatccagcgttgatgtcaccatctcgttcagcctaccagaagcgactcgctgaagca
tgcaacatgcatgacagaaccagaatcttggccttcaagaacaagcctccaacaccagtc
gagctcttccctaaggaacttctgtcccctccacctctatccaaatccgctaagcctaaa
cgatgcattcctcagacttctgagaggaccttggacgcacctgatatcttagatgacttt
tacttgaatttgctagactggggtagcagcaatgttgtcagtattgcccttgaaaatacc
gtttatctttggaatgcttcagattcctccacttcagagcttgtcactgtagatgatgat
gatggtcctgtcacaagcgttagctgggcccccgatggtcgccatttagccattgggttg
aacaactcccatgtccagctctgggataccactgcttgtaaacagctaagggcaatgaag
ggtggacacagagcaagagtgggttcattggcttggaacaaccatattctgacaacagga
ggaatggatggtaaagttgtaaacaatgatgttagagtgagatctcacatcgttgaaaca
tacatgggacacaaccaggaggtttgtgggctcaagtggtcaccctcaggacaacaattg
gcaagtggtggaaacgataatgttgttcacatatgggatagatccgtggtttcttcaaat
tcacctacccgatggcttcacaggtttgaggaacacatagctgctgtgaaggcactggct
tggtgtccctttcagggtaatctactggcttctggtggaggtggaggtgatcattgcatt
aagctgtggaacacacacactggtgcgagattgaattctgttgacactggatcgcaagta
tgtgctctgctatggaaccagaacgagcgtgagctacttagctcacatggtttcaccgag
aaccagcttaccctttggaagtatccttctatggtgaaaatggcagatctcaatggtcac
acttcgagggtgctgtatatggcgcagagtccagatgggtgtacagtggcatctgcggct
gcagatgaaactcttagattttggaatgtctttgggagcccagcagaagcatgcaaagcc
gcagcgccaaagacatataatgagccctttgctaatttcacccgtattcgttga
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