Medicago truncatula (barrel medic): 25499564 Help Entry 25499564          CDS       T01716                                  Name (RefSeq) splicing factor 3B subunit 3   KO K12830   splicing factor 3B subunit 3 Organism mtr  Medicago truncatula (barrel medic) Pathway mtr03040   Spliceosome Brite KEGG Orthology (KO) [BR:mtr00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     25499564  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:mtr03021]     25499564    03041 Spliceosome [BR:mtr03041]     25499564    03036 Chromosome and associated proteins [BR:mtr03036]     25499564 Transcription machinery [BR:mtr03021]  Eukaryotic type   RNA polymerase II system    Coactivators     SAGA/TFTC/STAGA complex      25499564 Spliceosome [BR:mtr03041]  Complex A   U2 snRNP components    U2 snRNP specific factors     25499564  Complex B     25499564  Complex C    U2 SnRNP specific factors     25499564 Chromosome and associated proteins [BR:mtr03036]  Eukaryotic type   Histone modification proteins    HAT complexes     STAGA complex      25499564     TFTC complex      25499564 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Beta-prop_RSE1_2nd Beta-prop_RSE1_1st CPSF_A Motif Other DBs NCBI-GeneID:  25499564 NCBI-ProteinID:  XP_013450306 UniProt:  G8A1A5 LinkDB All DBs Position 7:complement(50805705..50820039) Genome browser AA seq 1370 aa AA seqDB search MAVSEQECSSAKSSPSSSSSSTSRYYLSKCVVRASAILQVLYAHLRSPSSNDVVFGKETS IELVVIDEEGNVQTVCDQPVFGIIKDLAVLPWNDKFCTRRPQTQGKDLLVALSDSGKLSL LTFCNEMNRFFPITHVQLSNPGNIRDLPGRMLAVDSSGCFIAASAYEDRLALFSMSTSMT GSDIIDERIIYPSESEETASTSRTMQKTSISGTIWSMCFISVDSRQPIKGQNPVLAIILN RRGALLNELLLLEWNVKAHIVSVISQYVEAGPLAHNIVEVPNSPGLAFLFRAGDVLLMDL RDPHNPLCVYKTCLNILPNAIEEQTYVDDSCKLHDLDDEGFSVAACALLQLSDYDPMCID SDSGGTNSGPKYICSWSWEPENYEVPRMIFCVDTGEFFMIEVYFDSDGPKLSLSECLYKG LPCKELLWVKEGYLASIVEMGDSVVLKLKDGRLCFTNLIQNIAPIFDVTSGDYHDEKHDQ MFACCGVTPEGSLRVIQSGINVEKLLRTPSTYEGVAGTWTVRMKISDQYHSFLVLSFLGE TRILSVGLSFTDVTDSVGFQPNVCTLACGLVSDGLLVQIYQSAVKLCLPTKDGHSEGIPL SSPICTSWYPDNLNISLGAVGHNFIVVSTSNPCFLFILGVRMLSAYQYEIYEMQHLELQN EVSCISIPRTKYGKKRSNSSISENNSSMASTVSGVDINKTFVIGTHRPSVEIWSFDPNGG VTVVACGTISLKSTAGTAKSFCIPQDVRLVFVDKYYVLAGLRNGMLLRFEWPTEPSHSSS INVVDTALSSINLVNSTTMAINVNLPCMLQLIAIRRIGITPVFLVPLDDTLDADIIALSD RPWLLHSARHSISYTSISFQPSSHATPVCSIDCPKGILFVAENSLHLVEMVYSKRLNMRK FHLKGTPRKVLYHNESQMLLVMRTELSIGTCLSDICCVDPLSGSVLSSFRLELGETATSM ELIRVGSEQVLVVGTSLYSGPPAIPSGEAESAKGRLLVLCIDHVQNSDSGSMTFCSKAGS SSQRTSPFNEIVGHVPEQLCLSSSSLASSPDDNSFDGIKLDENEIWQFRLASATTWQGIV QAICPYLDRYFLASAANAFYVCGFPNDTPQRVRKYAVGRTRYSIRSLTAYFSRIAVGDNR DGILFFSYHEEARKLEQLYGDPSQRLVADCILMDDNTAIVSDRKGSIAVLCSDHLEAPNN ASTECNLRLSCAYFMAEIAVSIRKGSYSYRLPADDLLSGGIGPKTNVDSLQNTILVSTLL GSIMIFIPLSREEYELLEAVQARLAVHHLTAPVLGNDHNEFRSRENPVGTPKILDGDMLT QFLELTNMQQNNILSMEPLDVVKPSLKPLLPQFSVNQVVQLLERVHYALN NT seq 4113 nt NT seq  +upstreamnt  +downstreamnt atggcggtttccgaacaagaatgctcttccgccaagtcaagtccatcttcttcatcatcc tctacttcgcgttattatctctccaagtgcgttgtcagagcaagcgccattcttcaggtc ctctacgctcaccttcgttctccttcctcaaacgacgtcgttttcggcaaggagacatct atagagttggtggtgattgatgaggaggggaatgtacaaaccgtttgtgatcagcctgtt tttggtatcattaaagatcttgctgtattgccatggaatgacaaattttgcacccgtcgt ccacagactcaaggtaaagacctcttggttgctttatcggattccggaaagctgtcattg ctcacattttgcaatgaaatgaacaggttttttcctataacacatgttcaactatctaat cctggaaacataagggatcttccgggacgaatgttggcagttgattccagtggttgtttt atagctgcaagtgcatatgaagatcggctggctctgttttctatgtcaacgtcaatgact gggagtgatatcattgatgagagaataatatatccctctgaaagtgaagagactgcaagt acttccagaaccatgcagaaaaccagtattagtggtactatttggagtatgtgctttatt tcagtagattcccgacaaccaatcaaggggcagaatcctgtattagctattattctaaat aggaggggagctcttctaaatgaattgctcttattggaatggaatgttaaagcacatata gtctctgtcatttctcagtatgttgaagctggacctctagcacataacattgttgaagtt cctaactctccgggacttgcgtttctattcagggctggtgatgttctgttaatggatctt agagatcctcacaatccattatgtgtgtacaagacttgcttgaacattttacccaatgca attgaagagcagacttatgtggacgactcttgtaaattacacgatcttgatgatgaaggc tttagtgttgccgcctgtgctttgttgcagcttagtgattatgatcctatgtgcatagac agtgacagtggtggtactaattctggtccgaagtacatatgctcttggagttgggaacct gaaaattatgaagttcctaggatgatcttttgtgtagacactggagaattttttatgatt gaagtttattttgactccgatggccctaaattgagtctctcggagtgtctctataaaggt ctaccttgtaaagaacttttgtgggttaaggagggatatctagcatcaattgtagaaatg ggggacagcgtggtcctgaaattgaaagatggaaggctatgctttacaaatcttattcaa aacattgcaccaatctttgatgtgacatctggggattatcatgatgagaagcatgaccaa atgtttgcttgctgtggtgtgacacctgaggggtcattaagggttattcaaagtggtatc aatgtagaaaagctacttagaaccccttctacttatgaaggggtagctggtacttggacc gttcgaatgaaaatttcagatcaatatcattcttttctagttctatcatttcttggggag actagaatattgtcagttggcttaagttttactgacgtgactgattctgttggtttccaa cctaatgtatgtactttggcatgtggccttgtgagtgatggtttgcttgttcagatctat caatctgctgttaagctttgtttgcctactaaggatggtcattctgaaggcatccctttg tcctctcctatttgcacatcttggtacccagacaatctgaatattagtctgggggcagtt gggcataatttcatcgttgtgtcaacctccaacccatgttttttgtttatccttggggtt agaatgctatcggcttatcaatatgaaatttatgaaatgcaacatttggaactgcagaac gaagtatcatgcatttccatccctagaacaaagtacggaaaaaaacggtcaaattcatcc atttcagaaaataatagctccatggcttctactgtaagtggagtggacatcaataaaaca tttgttattggcacccataggccttctgtagagatttggtcttttgatccgaatggtgga gtcacggtagttgcttgtggaacaatttcattaaaaagtacagcggggactgctaaaagt ttttgcatacctcaagatgtacgactcgtgtttgttgataaatattatgttcttgccgga ttgcggaatggaatgctccttcgctttgagtggccaaccgaaccgtctcattcatcatca ataaatgtggtggacactgctttatcttctataaatttggtaaattctacgaccatggct atcaacgtgaaccttccttgcatgcttcaattgattgccattcgtcgcattggcatcact ccagttttcttggttcccctggatgacacacttgatgctgatataattgcactaagtgat aggccttggttgttgcacagtgcaagacacagcatttcctatacttctatctcatttcaa ccatcttcacatgcaactcctgtttgctctattgactgtccaaaaggaatattatttgtt gctgaaaacagtttgcatctggtggagatggtctacagcaagagacttaatatgagaaag tttcatttaaagggcactccacggaaggtcctgtatcacaacgaaagtcagatgttactt gtgatgaggaccgaactgagtattggtacatgtttgtctgacatatgttgtgtggatccc ctaagcgggtcagtactatcgtcttttagactagaacttggagaaacagcaacatccatg gaattaattagggttggaagtgagcaggtgcttgtggttggaactagtctgtattctggt ccacccgcaatccccagtggtgaagctgagagtgccaagggtcgtctgcttgttctctgc attgatcatgtgcaaaattcagacagtggttcaatgaccttctgttcgaaggcagggtca tcctctcaaagaacttcaccattcaatgaaattgttggtcacgttcctgaacagctatgc ctatcaagcagtagccttgccagcagccctgatgataatagctttgatggcatcaaactt gatgaaaatgaaatttggcagttccgattggcttctgcaactacatggcagggaattgta caagcgatctgtccttatcttgatcgctattttttggcatctgctgccaatgctttctat gtctgtggtttcccaaacgacactccacaaagagtgagaaagtatgctgtgggaaggacg cgctactcgataagatctttgactgcatattttagtagaattgcagttggagataatcgt gatggtatccttttcttttcttaccatgaggaggcaagaaagttggagcaactctacggt gacccatcacagaggttggttgctgattgcattctcatggatgataacacggctattgtt tcagatcgtaaaggaagcatagctgttttatgttcagatcatttggaagcaccaaacaat gcaagtacggaatgcaatttgagactaagctgtgcttatttcatggctgagatagctgtg agcatccgaaagggctcatattcatacagacttccagctgatgatttgttgtcaggtggc attggccccaagacaaatgttgactcgctacaaaatactattcttgttagtactctgtta ggaagcataatgatcttcatccctttatcaagagaggaatatgagctcttagaagctgtg caagcaagacttgctgtccatcatttgactgcacctgttcttggaaatgatcataatgag tttcgcagccgtgaaaatccagttggaacaccaaagatacttgacggggacatgttgaca cagtttctggagctgacaaatatgcagcaaaataacattttgtctatggaaccacttgat gtggtaaaaccaagtttgaagccgctcctaccacaattttctgtcaaccaagttgttcag cttcttgaacgggttcattatgcactgaactaa

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