Medicago truncatula (barrel medic): 25499590
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Entry
25499590 CDS
T01716
Name
(RefSeq) U1 small nuclear ribonucleoprotein A-like isoform X1
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
25499590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25499590
Spliceosome [BR:
mtr03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
25499590
Complex B
25499590
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
DUF4523
RRM_occluded
xRRM
Motif
Other DBs
NCBI-GeneID:
25499590
NCBI-ProteinID:
XP_039684256
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All DBs
Position
7:complement(51406779..51410678)
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AA seq
245 aa
AA seq
DB search
MAEVNANPEPPQNMTIYINNLNEKIKIDELKKSLHAVFSQFGKILEVLAFKTLKHKGQAW
VIFEDVTSASNALRKMQGFPFYDKPMRIQYARTKSDVIAKADGTFVPREKRKRHDDKAGK
KRKDQNDANLAGTGLNPAYAGAYGATPALSQIPYPGGAKSLLPEAPAPPNNILFIQNLPN
ETTPMMLQMLFLQYPGFKEVRMVEAKPGIAFVEYGDEMQSTVAMQALQGFKIAPQNPMLI
TYAKK
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagttaacgctaaccccgaaccccctcaaaacatgaccatctacatcaacaac
ctcaacgaaaaaatcaaaatcgacgagttgaagaaatctttgcacgctgttttcagccaa
tttgggaagatacttgaggttttggctttcaagactctgaaacataagggtcaagcttgg
gtgatttttgaggatgttacttctgcttctaatgctcttaggaaaatgcaaggtttcccc
ttctatgataagcccatgagaatacagtatgccaggactaaatctgatgtcatagcaaaa
gcagacggtacttttgttcctcgggaaaaacgaaagaggcacgatgacaaagcgggcaaa
aaaaggaaggaccaaaacgatgctaatttagctggaactggcctaaatcctgcttatgct
ggtgcttacggtgcaactcctgctttatcccagataccttatccaggcggtgcgaagtcc
ttgctacctgaggctcctgcaccaccaaataatattctctttattcagaatcttcctaac
gagaccactcccatgatgcttcaaatgttgtttcttcaatatcctggattcaaggaagtt
agaatggttgaagcaaagccaggaattgcctttgtggaatatggagatgagatgcaatcc
acggtggctatgcaggcgctgcaaggtttcaagatagccccacaaaaccctatgttgata
acttatgcaaagaaatag
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