Medicago truncatula (barrel medic): 25500139
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Entry
25500139 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25500139
KO
K14315
nucleoporin NDC1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
25500139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtr03019
]
25500139
Messenger RNA biogenesis [BR:
mtr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
25500139
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
25500139
NCBI-ProteinID:
XP_013443923
UniProt:
A0A072TM92
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Position
8:complement(1521047..1526576)
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AA seq
471 aa
AA seq
DB search
MSPKPREVVVRLRNKLFLTFLIWQLIPSTLIFLLYFSIIPNTSFSSFPLFLFSQFIFSVS
ISLIPSPFGPRKINLSLAFLLFVPIFAFSWSVAALCLFGRVGFRGFLVGAYYGVIYVDNR
RWLWVLEFPFIQHHPLLTFKRRIPFAAKYAYKLSIVGFFSSAILSVMIPDPDPFIKCITA
TREFVAEQIVLFVATFAIFFCWELTHTLHRVLHTKRFVFAPPKGSAAAEKNPSELLLSVL
QRSNPTSLLRYHAYLDLCMVSENNVDAWRRAAIFEKTGQTYKLVIAVCLRPLEQLASRLR
KDLGNSAGKPTNLSNQLSSPTDVKHIEELDNFQSYAWCSRIVASLTARSCKEDKFGFARL
SGSNTAVVSTLISCLLAVENFMGKKTNLQSPNQLGSAVKRENGPVNSKAYAIADVLKTSI
YQIVSVFHDEMLSDLKSRNLEKDWITSNTPRFGTRRMLIQKLHLFLAFQAT
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaaaaccaagagaagttgttgtgagattaaggaacaaattattcctaaccttt
ttgatatggcaattaataccctcaactctcatcttccttctctacttttccattatcccc
aacacctcattttcgtcttttccccttttcctcttttcccaattcatcttctccgtttct
atctccttaatcccttcaccttttggtcctcgtaaaatcaacctctcgctcgctttcctt
ctctttgtccccatcttcgcgttctcctggtccgttgcggcgctttgtctctttggaaga
gttgggtttaggggttttcttgttggtgcctattatggggttatttacgttgataaccgt
cgttggctttgggttcttgagtttccctttattcagcatcatcctttattgacttttaag
aggcggattccttttgctgctaaatatgcttataagctttccattgttggtttcttttct
tctgctattttatcggtgatgattcctgaccctgaccctttcatcaagtgcatcactgca
actcgggagtttgtagccgagcagattgtgttatttgttgctacttttgctatcttcttc
tgttgggaattgactcatactttacatcgggttttacataccaagagattcgtatttgct
cccccaaaaggatcagcagccgcagagaaaaatccaagtgagctcctcctttcagttcta
cagcggagtaatccaacatctcttcttcgatatcatgcttatcttgatctctgtatggtt
tccgagaacaatgttgacgcttggcggcgtgcggcaatttttgaaaaaaccggtcagact
tacaaattggtaattgctgtgtgcttgaggcctttggaacaacttgcctcaagattacgc
aaggacttggggaattctgccgggaaacctacaaatctatcaaatcaattatcctcccca
acagatgtgaagcacatagaagaactggataacttccagtcatatgcttggtgttcaagg
attgttgcctcactgactgcccgttcatgcaaagaagataagtttgggtttgctcggctt
tctgggagtaacactgctgtggtttcaaccctgatatcatgccttcttgctgttgagaat
ttcatgggaaagaaaacaaacctgcaatcaccaaatcagttgggatctgctgttaaaaga
gaaaatgggccagtgaattcaaaagcttatgctattgctgatgttctcaagacatcaatc
taccaaatagtatctgtattccatgatgagatgttgtctgatcttaaatcacgtaatttg
gagaaggactggatcacaagcaatacaccacgttttggtactcgcaggatgcttattcaa
aaattacatcttttccttgcttttcaggctacctag
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