Medicago truncatula (barrel medic): 25500205
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Entry
25500205 CDS
T01716
Name
(RefSeq) probable polygalacturonase At3g15720
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Module
mtr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
25500205
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
25500205
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
25500205
NCBI-ProteinID:
XP_013444005
UniProt:
A0A072TKS8
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Position
8:2429053..2432609
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AA seq
389 aa
AA seq
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MQGFIALALILGFVSPCLCTRMNVGTENAIYNVIQYGARGDGITDDLQAFVSAFSSACKA
AGMSTLIIPAGKKYMVSKANFSGRCSARVLIQLEGQIVAPSRAAWKSKLYWISVEYVDEL
TIDGNNKGGFHGGGPTWWQCPTCDRPVMLFFHSCNGLNVRNLRILNSPRSHVAVTMCNHS
TFSHISINSAATSPNTDGFDISRSSNVLIENSMIRSGDDCIALNSGSFFINVTRVTCGPG
HGISIGNLGRSRSNDQVSDVYIRNCTFIGTTNGARIKTVPGGSGYARQITFEQVILSNVM
NPIIIDQGYKISPTDTSVRVSSVTYRGFTGTSASKIAVNLNCSSSGCFDILLDQNNIVAT
QAGKMTSFFCRNAHGTVRNTFPNVSCLSN
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcaagggttcattgctcttgctttgattcttggttttgtttcaccttgtctatgtaca
aggatgaatgttggaaccgaaaatgcaatttataatgtgatacaatatggtgcacgtggc
gatggcataactgatgatttacaagcatttgttagtgcatttagcagtgcgtgtaaagca
gcagggatgtcaacactaataataccagctggaaaaaaatacatggtgtcgaaagcaaat
tttagtggtcgttgcagcgccagagttctcattcagcttgaaggacaaatagttgcacct
tctagagcagcgtggaaatctaagttatattggattagcgtcgaatatgtagacgaactc
acaattgatggcaataacaaaggaggttttcatggaggtggtcctacttggtggcaatgc
ccaacttgtgatcgacccgtgatgttgtttttccattcctgcaatggtctcaatgttaga
aacttgaggatcctgaatagcccaagatctcatgttgctgttactatgtgcaatcattca
acattttctcatatatctattaattctgctgctactagccccaacactgatgggtttgac
atttctcgttccagtaatgtcttgatagaaaattctatgataagatccggtgatgattgt
attgcgcttaatagtggctccttttttattaatgttactcgggttacttgcggaccaggc
catggaataagtattggcaaccttggtagaagtagatcaaatgatcaagtttccgatgtt
tatatacgtaattgtaccttcattgggactacaaatggagcaagaatcaagacggttccg
ggtggatcaggttatgcaagacagattacatttgagcaagtcatccttagtaatgttatg
aacccaataattattgaccaagggtacaaaattagtccaacggatacatctgtgagggtg
agttcggtgacatatcgaggatttaccggaacttctgctagcaagatagctgttaattta
aattgtagctcctctggttgtttcgacattctattggatcaaaataacattgtagctact
caagcaggaaaaatgacttcatttttttgtagaaatgctcatggaacagttagaaatact
tttccaaatgtctcttgtctatctaattaa
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