Medicago truncatula (barrel medic): 25500208
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Entry
25500208 CDS
T01716
Name
(RefSeq) LOW QUALITY PROTEIN: putative rRNA methyltransferase YqxC
KO
K06442
23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:
2.1.1.226
2.1.1.227
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25500208
Enzymes [BR:
mtr01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.226 23S rRNA (cytidine1920-2'-O)-methyltransferase
25500208
2.1.1.227 16S rRNA (cytidine1409-2'-O)-methyltransferase
25500208
Ribosome biogenesis [BR:
mtr03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
25500208
23S rRNA modification factors
25500208
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FtsJ
Methyltransf_11
Methyltransf_24
Methyltransf_25
Motif
Other DBs
NCBI-GeneID:
25500208
NCBI-ProteinID:
XP_024629124
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All DBs
Position
8:2447365..2452196
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AA seq
233 aa
AA seq
DB search
MDFARKGICEWEENYKAGTPVSDKSVVEIKAEVPKYVCRAGHKLEGAIEQLGVDVAGKVA
LDSGLSTGGFTDCLLQYGASHVYGVDVGYGQVADKIQRDERVTIIERTNLRYIKELPQNV
DLVTLDLSFISILTVMPAVVNVMKEDAALVTLVKPQFEARRSQVGKGGIVKDPAVHQEVL
EKITKGVESFGFCSKGWIESPLKGAEGNTEFLVHFTRIHNKGVENHEEISEEI
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggattttgcaaggaaaggtatatgtgaatgggaagagaattataaagctggtacacct
gtgtctgacaaatctgttgtggagataaaagctgaagttcccaaatatgtatgtagagct
ggacataagttggaaggtgccattgaacagctcggtgttgatgttgctggtaaagtggct
cttgattctgggctgtcaactggaggatttactgactgcttacttcagtatggtgcatca
catgtttatggcgttgatgtaggttacggacaggtagcagacaaaattcaaagagatgaa
cgtgtaactattatagagcggacaaatttaagatatatcaaagaactcccacaaaatgtt
gatttggtgaccctagatctctcattcatctctattctaacggtcatgcctgctgtggta
aatgttatgaaggaagatgctgcattagtgaccttggttaaaccacaatttgaagctcgg
agatctcaagtaggaaagggagggatagtgaaagatcctgctgtccatcaagaggttctc
gagaagattacaaagggagtggagagttttggtttctgcagcaaaggttggattgagtct
cctctcaaaggtgccgagggtaatacagaattccttgttcacttcaccagaatccataac
aaaggtgttgaaaatcatgaagaaattagtgaagaaatttag
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