Medicago truncatula (barrel medic): 25500419
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Entry
25500419 CDS
T01716
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mtr03041
]
25500419
03036 Chromosome and associated proteins [BR:
mtr03036
]
25500419
Spliceosome [BR:
mtr03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
25500419
Chromosome and associated proteins [BR:
mtr03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
25500419
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Suf
HAT_PRP39_N
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_1
TPR_14
HAT_Syf1_CNRKL1_C
Lsm_interact
UTP6_C
TPR_19
HAT_Syf1_M
ARM_TT21_5th
Motif
Other DBs
NCBI-GeneID:
25500419
NCBI-ProteinID:
XP_013444284
UniProt:
A0A072TM81
LinkDB
All DBs
Position
8:complement(5232449..5245259)
Genome browser
AA seq
830 aa
AA seq
DB search
MEVEQTLTLTSEAEREPEKDEATAMSDSSNDSDSDSDDEAQQNIQLQSLQTELAANPANY
DAHLQYITLLRKTGDVDKLRKAREVMAEIFPLTPSLWQQWIKDELSLTTANNDTFSTVVK
LYECAVFDYLSVSLWCDYLQSVQDFDPMLKQSSPTAISKGRDLFERALTAAGLHVAQGSK
IWEAYRQYEQAILLTIDESDTQAKEKQVQHIRSLFHRQLSIPLADMNSALIAYKTWEVEQ
GNFHDVSIDLIDRYPHVASAYQKALEMYNARVHLEEQISSQDISDSERLQQYMNYLKFEQ
SSGTPARIQVLYERAITDFPLSPDLWLDYTHYLDKTLKVGKIVSDVYSRATKNCPWVGEL
WVRYMLCLERGHASEKDLAAIFEKSLQCTFSTLDEYLDLFLTRVDGLRRRMTFTKEEDPL
EYKIIKETFQRASDYLSPYMKNTDGLLQIHAYWAHLETKLGKDITAARGVWENFLKTCGS
MLAAWTGYIAMEVELGHINEARSIYKRCYSKRFYGTGSEDICNSWLRFEREFGKLEDFDL
ALQKVTPRLEELRLFRLQQESKSVEESENNPRKNVGEKRKPGADIADEQSPAKRKKDAGK
KIQKAPKDNIDQVQNSTQVTKVEGSNQKNNKSDDSQKQQLTRGKHRAYSDQCTAFLSNLN
PTANDGHIRDFFSDIGGIVAIRILHDKFTGKSRGLAYVDFLDDEHLVAAVAKNKNTLLGK
KLSIARSNPKRGGKETSNPKKSEHEHDIDHSDKKGSVSKETDDTSKKDVKDGKFSSRKPG
SDNIQFKGKNTFAVPRNVRALGCTENKPKAEVGDEQPKSNEEFRKMFIQR
NT seq
2493 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggagcaaacactaaccctaacttcagaagctgaacgagagccagagaaagac
gaagcaacagccatgtctgattcctccaacgattccgattccgattccgacgatgaagct
cagcagaacatccaacttcaatctctccagaccgagcttgccgctaatcccgccaactac
gatgctcatttgcaatatataacgctacttcggaaaaccggtgatgttgataaactgaga
aaagcaagggaagttatggctgaaatctttccattgaccccttccttgtggcagcagtgg
attaaagatgagctttctctcaccaccgccaataatgacactttctctaccgttgttaag
ctttatgaatgcgcggtgtttgattatctgtctgtctctctatggtgtgactacctccaa
tctgttcaagactttgatccaatgctaaaacaatcttcacccactgctatttccaaggga
agggatctctttgaaagggcccttacggctgctggtttgcatgttgcccaaggcagtaag
atatgggaagcatataggcaatatgaacaggctatacttctgactattgatgaatctgat
acacaggcaaaagaaaagcaagttcaacacattcgaagtttattccatcgccagttgtct
atcccccttgctgacatgaattcagcacttattgcctataagacttgggaggtggaacag
ggaaattttcatgatgtatccattgacctgattgatcgttatcctcacgttgcatcagca
taccagaaggccttggagatgtataatgctcgcgttcatcttgaagaacagatttctagc
caagatatttctgattcagaaagactacaacaatacatgaactatttgaaatttgagcag
tcttcaggaacaccagcccgaattcaagttctatacgagcgggctattaccgactttcct
ttatcacctgatctctggcttgattatacacactatttggacaaaactttgaaggttggt
aagattgtttctgatgtatattctagggccactaagaactgcccttgggtcggagaactt
tgggttcggtatatgctttgtttggagcgcggtcatgcttcagagaaagacttggctgca
atctttgagaagtccttgcaatgcaccttttctacgttagatgagtatcttgatttgttt
ctcacccgggtagatggcttaaggcgaagaatgacattcaccaaagaagaggatccattg
gaatataaaataataaaggagaccttccagcgtgcatcagattacttgtcaccatacatg
aagaatacagatggtttgttacaaatacatgcttattgggctcatttagaaacaaaactt
ggaaaagatataactgcagctcgtggagtttgggagaattttcttaagacctgtggttca
atgctggccgcatggactggttatatagccatggaagttgaattgggtcacataaatgaa
gcaaggtccatatacaaaagatgctacagtaaaaggttttatgggaccggttcagaggac
atttgcaactcatggttacgctttgagagggagtttggcaagctggaagattttgatctt
gctttgcaaaaggttaccccacgtctggaagagctacgtttatttaggttgcagcaggaa
tccaagtcagtagaggaaagtgaaaataatccaagaaaaaatgtaggtgagaaaagaaag
ccgggggcagatatagccgatgaacagtcgccagcaaagcgaaagaaagatgctggtaaa
aaaatacaaaaagcacccaaggataatatagatcaagtgcagaactctactcaggtgaca
aaagtggaagggtccaatcagaaaaataacaaatcggatgacagccaaaagcaacagctt
acccgtggaaaacaccgggcatactctgaccagtgcactgcttttttatcaaatcttaac
cctacggcaaatgatgggcatattcgtgatttcttcagtgatatcggtggaattgtagcc
atccgcatcctacatgacaagttcactggaaagtccaggggactagcttatgtggacttt
ttggatgacgagcaccttgttgcagcggtagctaagaacaagaacaccttacttgggaaa
aagctaagtattgctcgatcgaaccctaagcgaggtggaaaggaaacttctaatccaaaa
aagtcagaacatgaacatgacattgatcattctgataaaaaaggttcagtatcaaaagaa
actgatgatacctccaagaaggatgtaaaagatgggaagttctcttctagaaagccagga
agtgacaacattcagtttaaagggaagaatacttttgctgtgcctagaaatgtcagagca
cttggttgcactgaaaataaaccaaaagcagaagtgggtgatgaacagccaaaatccaat
gaagaattcagaaagatgttcattcaacgataa
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