Medicago truncatula (barrel medic): 25500663
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Entry
25500663 CDS
T01716
Name
(RefSeq) uncharacterized protein LOC25500663 isoform X1
KO
K24155
rabconnectin-3a
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
25500663
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mtr04131
]
25500663
Membrane trafficking [BR:
mtr04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
25500663
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
25500663
RAVE complex
25500663
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML
WDR55
Beta-prop_EML_2
Beta-prop_IFT140_1st
ANAPC4_WD40
Beta-prop_TEP1_C
EIF3I
DUF3452
Motif
Other DBs
NCBI-GeneID:
25500663
NCBI-ProteinID:
XP_024628332
LinkDB
All DBs
Position
8:9685692..9701033
Genome browser
AA seq
2536 aa
AA seq
DB search
MTPNTIKETSTSSSCSQNIIDHHHLPLHLLRSDTIPPSPTLSNSTIDFLPNFSGYSWIAY
GASSLLVITHFPSPLSDLQSRIGPIFRQFFELSCHHSSPVSSVSWAPQMPSHGDLAAAAE
NSIWVFNHGSVKSKGSFCWSQNAVLVQRTKVETIRWTGSGDGIISGGMEVVFWKKSNKCW
EIAWKFKADQPQTVVSATWSVEGPSATASRPSKEQIEGSLINQVSKCVFVCQSNGVCEYS
KAKLQHPLPVVTIQWRPSRGRLSNRYSRYSKGNVLLTCCLDGTARLWSEVDNGKTKRAGK
NTGSSFCVVAVIEISQCLNGTLGSDIFVMWGTEIVGLFRRGEGDKQIFSNEEFEHDVRKC
DWLVGYGPGMLLSFWAVHCLDDVSPLRFPRVTLWKKHELQSHDIGTIYKFDSSDFKNALL
MQNKVIISRNSLSGPPSICSLLQLLPCNSLVWSFFHIQETHDAVENSLDNGKTDAISSHL
TGGSLNLDGHSGKILKVSIHPYTSEAQVAASLDSNGLLIFWSLSNISNSILGCPTLVPTW
ELCGKLATQHSCSMYTSLTWAPSILDEQLVFFMGHNRGIDCFIVDISRTEEENIECHYLC
TIPFTGHGPYEDGPHDIFAIPLNSTCNKTFRNNKLMLLAIWMGRFEALSWEVNLHSFDMS
TSCSECNFDAKSIDDNSVWAFESTYASKRYYITVIPCSSDFPSSNDSVTSFAVADPGTLS
HRQQELGFANDLCSSSPTYILATGCSDGSLKLWKSNCDNPLTLNLPWELVGMFVAHTGPV
KGICFTDCGQKVATFCNGNDSNAVNTIHIWDAINLIISGTFILEDTLTVESDITTLKWLT
LGTGELLLGVCLQNELQVYARKRCDGLTTSNSVNFLKLNVWSQIAFAQTSLPINDFLWGP
RAAPVVIHGNYFSIFSHWLFHVDKKQQSNFRSRDSDPRANNCKIETYEDISSAVFTDCDI
GTFRELSTVDSLADCDSKQSITNNVNSNNLYSSVILAKEQLKSELLTKVGLWSILEVADL
IGGSLPTYHPDVLLINISSGNWKRAYAAVKHFVECLISNYDPKKRQITRRNGLPSIILSD
YLEGRMPKSSQDKGFNWSGDVASITSFSQAQSSSFQFPYHSDSSSENKRSSTSTSSELNG
FIESLENFPNLPHLINIERTEILSIIDLLREVSNPDSSSAYQSLDEPGRRFWVALRFQQL
HFQRKFARAASIEEMIINSRLFVWAYHSDCVGNLFGSVIPNEPSWQEMRALGMGFWYANI
PQLRARMEKLARAQYLKNKNPKDCALLYIALNRVQVLAGLFKISRDEKDKPLVSFLLRNF
QDEKNKAAALKNAYVLLGKHQLELAVAFFLLGGDHSSAINVCAKNLGDEQLALVICRLVE
GHGGPLEHHLIAKYIFPSAIDRGDYWLASLLEWEMGNCYQSFHRMLEFSVNTVAPESTIM
SNSGSFLDPTIGFYCQMLAAKNSTRNAVGEQNSAILLRWATLMTVTALKRCGIPLEALEY
FSSSPSMLGTADQENELGDVLSSTLKPLPGKSSNWLSADLSVHLEFQVKLNLALGYLSKL
IREHPSWPNTFTESDKEASYSEEYMIQYEKSNDSFKQKLYAGFDLFEQRFSLTPCYLISS
ILLLLCHHGLWYIGYDVTDGSTHGEPSQKKTDRFDVSNLSPSQFKPLFKAAEEISFLYSR
FFSACGMVYSQQSSTPETGASADIKSKFLDTSQCHFEGLLNSLWYLRAVLRSQLRSISKD
LVKKHLEILDLFEYYLYFSLAWLHRNSEALLFMVQPFLIAHDGCNPYEVDMVNLKKLIPK
VAQLLAQNSFITNVESLQISKCAEDKLDADMKYSVPDDEKWKILGTCLWQHMSRFMISNL
NLVLAKLEDENVSGSFHRYRESNTPRNLDSDSISLPEQILLVTFNLCDLLTTTVTHISSY
HIKQLAEFLWQKLENDSNVMTLEWLKQTRQSESNQNNNLNISELVNGKDNYLVHQLLWDH
CADPKLIRDCFAQEKLNWLKDSDHKPMKGWNDLYTIMTGLHKTDDSHDNHEIESPVKGIL
PSGHASARSNSKDITCANIDDFQSPREIYKRNGELLEALCINSTNQQEAAVATNRKGIVF
FHLEDEIPFSGEADLLWTKADWPQNGWAGSESTPAPTCVSPGVGLGRKKGAHLGLGGATV
GMDSSAWPSRDLTGNGALAMLGYAGIGASGLGWETQQDFEDFVDPPATLENTSSRAFSSH
PMRSFFLVGSSNTHIYLWEFNKDKATATYGVLPAANVPPPYALASISALQFDHFGHRFAS
AALDGTVCTWQLEVGGRSNVRPTESSLCFNGQASDVTYVSSSGSIIAVAGYSSNNVNVVI
WDTLAPPSTSRASILCHEGGARSLSVFDNQLGSGSVSPLIVTGGKGGDVGLHDFRYIATG
KAKRHRRSDSIGHSSLTSLNYDKDHNVDGMLWYIPKAHSASVTKIATIPNTSLFLTGSTD
GDVKLWDAESSKLLHHWSKLHDKHTFLQSGSRGFGGVVRAAVTDIQVVPHGFLTCGGDGN
VKLVQLKSHLRGFGDE
NT seq
7611 nt
NT seq
+upstream
nt +downstream
nt
atgacaccaaacacaatcaaagaaacctcaacatcatcatcatgttctcaaaacatcata
gatcatcatcatcttcctcttcatctcctcagatccgacacaatcccaccatcaccaact
ctctccaattccactatcgatttccttccaaacttctccggttactcatggatcgcttat
ggagcttcttcccttctcgtcatcacccatttcccttctcctctttccgatcttcaatca
cgtatcggtcctatttttcgtcaattctttgaactttcatgtcatcattcttctcctgtt
tcatctgtttcttgggcaccccagatgccttctcatggtgatcttgctgctgctgctgaa
aattctatctgggtttttaaccatggttctgttaagtctaaaggttctttttgttggagc
cagaatgcagtgcttgtacaacgtacaaaagtggagaccatcagatggacaggatcaggg
gacggaatcatttctggtggaatggaggtagttttctggaagaagagtaacaaatgttgg
gaaatcgcgtggaagttcaaagcagatcagccccaaacagtcgtaagtgcaacctggtct
gttgaaggcccttcagcaactgcatcacgtcctagtaaagaacagattgaagggtcctta
atcaatcaggtaagcaaatgtgtgtttgtatgtcagagcaatggagtatgtgaatattca
aaagccaaacttcaacaccctctacctgttgtgacaattcaatggagaccatcaagggga
agactatcaaacagatacagtaggtattcaaaagggaatgtattactgacatgctgctta
gatggaactgctaggttatggagtgaggttgataatggaaagaccaagagggctgggaag
aacacagggtcctctttttgtgttgttgctgttattgagattagtcagtgtttaaatgga
actcttggttcagatatatttgtgatgtggggtacggaaattgtggggttatttagaaga
ggtgaaggagacaaacaaattttttccaacgaagaatttgagcacgacgtgagaaagtgt
gattggttagttggatatggtcctggaatgttgcttagcttttgggctgtccactgtctt
gatgatgtttccccgctgagatttccccgagttacattatggaagaagcatgaacttcag
agccatgacataggaaccatttataagtttgactcatctgattttaaaaacgcattactt
atgcagaataaagtcattatatcaagaaactccttgtctggtccaccaagtatatgctct
ttacttcagctcttaccttgtaattccttagtttggtcatttttccatattcaagaaaca
catgacgctgttgagaactcccttgataatggtaaaacagatgcaatatcttcccatttg
actggtgggtctttaaacttagatggacacagtgggaaaatattaaaggtttcgattcat
ccttatacaagtgaagctcaagttgctgcttctcttgattctaatgggctgcttattttt
tggtcactttctaatatttcaaactccattttgggatgtccaaccttggttcctacttgg
gaactctgtggaaagcttgcaactcaacactcgtgctccatgtatacaagcttgacatgg
gcaccttcaatacttgatgagcaactggtgttttttatgggacataacagggggattgat
tgcttcatagtcgatattagtcgaactgaagaggaaaatatagaatgtcactacttatgc
actattcccttcactggtcatggtccttatgaggatggcccacacgacatatttgcaatt
cctttgaactctacgtgtaataaaacatttcgtaataataaacttatgctattggcaatt
tggatggggagatttgaagctctatcatgggaagtcaacttgcactcttttgacatgtca
acaagctgttctgaatgcaactttgatgctaaaagcattgacgacaacagtgtttgggca
tttgaaagtacatatgctagtaaaagatattacattactgtaattccatgttcatccgac
tttccaagttccaatgattcggttactagttttgcagtggcggatccaggaaccctgagt
cacagacaacaggagttaggctttgcaaatgatctttgtagtagctctcctacatatatc
ttggccacaggctgctctgatggtagcttgaaactctggaaaagtaactgtgacaatccg
ttgaccctgaacttgccgtgggagcttgtgggtatgtttgttgcacatactggtcctgtc
aaaggtatatgtttcactgattgtggtcagaaagttgctacgttctgcaacggaaatgat
tcgaatgctgtcaatacgatccatatatgggatgctataaatctgatcatttcagggaca
tttattttagaagatacactcacggttgaaagtgatattactactctcaagtggttaact
ttagggactggtgagttattgcttggagtttgtttgcaaaatgaattgcaagtatatgct
cggaagcgttgtgacggcctgactacgtcaaactctgtaaattttctaaaattaaatgta
tggtctcagattgcatttgctcaaacttcccttccaataaatgatttcttatggggaccc
agagctgctccagtggtaattcatggaaattacttcagtatatttagtcattggttgttc
catgtggataaaaagcaacagagtaattttcgttctcgtgactcggatccaagggccaat
aattgcaagattgaaacatatgaagacataagttctgccgtttttactgattgtgacatt
ggtactttcagagagctttcaactgtagacagtcttgcagattgcgattcgaagcagtcc
atcacaaataatgtgaacagcaataacctgtacagcagcgtgattcttgccaaggaacaa
ttaaaatctgaactccttaccaaggttggtttgtggagcatcttagaagtagctgatctg
atcggtggatctttgcctacttatcaccctgatgtacttcttatcaatataagttcaggc
aactggaaacgtgcttatgcagctgttaagcattttgttgaatgcctgatttctaattat
gatcctaaaaagagacagatcaccagaaggaatggtcttccaagtatcatattgtcagat
tatttagaaggccgtatgccaaaaagttcgcaagataagggatttaattggagtggggat
gttgcgtcaatcacttcattttcacaggctcaaagtagctcgttccagtttccatatcat
tcggattccagttctgaaaataaaagaagttccacctcaactagttctgagcttaatggc
tttattgaatctttagagaattttcccaatttaccacatttgatcaacatagaaaggaca
gagattctctcaatcattgatctgctcagggaagttagtaatccagactcctcttctgca
tatcaaagtcttgatgaacccggacgaaggttttgggttgcactaaggtttcagcaacta
catttccaacggaagtttgctagagctgcatctatcgaggagatgatcattaactcaagg
ttgttcgtatgggcttaccactctgactgtgtaggaaatctatttggttctgtcataccc
aatgaaccatcgtggcaagaaatgcgtgctttgggtatggggttttggtatgctaacata
cctcaattgcgtgcaaggatggagaaattagcaagagcacaatatttgaagaacaaaaat
cctaaggattgtgcgttgctgtatattgcattaaacagagttcaagttttagccggcctt
ttcaaaatcagtagggatgagaaggacaagcctttagtgagttttctcttgcgcaatttt
caggatgagaaaaataaagctgctgctttaaaaaatgcttacgtcttattgggaaagcat
cagctggaattggcggttgctttctttcttcttggaggtgatcattcttctgctataaat
gtttgtgctaagaaccttggggacgaacaacttgcactagtcatttgtcgccttgttgaa
ggccatggcggaccattggagcatcacttaattgctaagtatatatttccatcggcaatc
gatagaggagactactggctggctagccttctagagtgggaaatgggtaattgctatcaa
tcttttcacagaatgctagagttttcagtaaacactgtggctcccgagtcgaccatcatg
tccaattctggttcttttctggaccctactattggtttttattgtcaaatgcttgctgca
aagaatagcacgcggaatgctgtaggagagcaaaattctgctatccttttaaggtgggca
actttgatgacagttactgccctaaaaagatgtggtattcctcttgaggcattggagtat
ttctcatcttcaccgagcatgcttgggactgcagatcaagagaatgaattgggcgatgtt
ctgtccagtacattaaagcctttgccaggaaaatcgtctaactggttatctgctgattta
tctgtgcatctggagtttcaagttaaattgaatttggcccttggctacttatcaaaactg
ataagagagcatccaagttggcctaacacttttacagaatctgataaagaagcctcttat
tctgaagagtacatgattcagtacgagaaatcaaatgatagttttaaacaaaagttatac
gcagggtttgatcttttcgaacaaaggttttcactgactccatgctatctaatcagctcg
atcttactcttactttgccatcacggactatggtacattgggtatgatgtgacagatgga
agcactcatggagaaccatctcaaaagaagaccgatagatttgatgtttccaatttatct
ccttctcaattcaaacccctgtttaaagctgcagaagaaatctcctttttgtattcaaga
tttttttctgcctgcggtatggtatattctcaacaaagctcaactcctgagacaggtgca
tcagctgatatcaaatctaaatttttggatacttcccagtgtcactttgaaggtcttctg
aattcattgtggtatttaagagctgttttgaggagtcaattgaggtctattagcaaagat
cttgtcaaaaagcatcttgaaatccttgatttatttgaatactatttatatttttcatta
gcctggcttcatagaaactcggaagcccttttatttatggtgcaacctttcttgattgca
catgatggttgtaatccttatgaggttgatatggtgaatcttaagaaacttatcccaaaa
gttgcacagttgttggctcaaaattctttcattactaatgtagaaagccttcaaatatcc
aaatgtgcagaggataaactagatgcagatatgaagtattcagttcctgatgatgaaaaa
tggaagatattagggacctgcttgtggcagcatatgtctagattcatgatatctaatttg
aatttggttcttgccaaacttgaagatgaaaatgtgtctggttctttccacagatatagg
gaatctaatactcctagaaatttggattctgatagcatcagcttaccagagcagattcta
ttagtcacatttaacttatgtgatttactgacgacaacagttactcacatttcttcttat
catattaaacaacttgcggaatttttgtggcagaaattggagaatgattcaaatgttatg
actcttgaatggttaaaacaaacaaggcagtcagaatccaatcagaacaataacctgaac
atttcggaattggtcaacggaaaagataactatcttgttcatcagttactatgggatcac
tgtgctgatcccaaattgatacgcgactgctttgcacaggagaaactcaattggttaaag
gattcggatcataagcctatgaaaggatggaatgacctgtatacaattatgacaggattg
cataaaaccgatgactcacatgataatcatgaaatagaatctcctgttaaaggaatactt
ccaagtggccatgcttctgcaagatccaactcgaaagatataacttgtgctaatattgat
gactttcagagtcccagagaaatttacaagagaaatggagaacttttggaggcactgtgt
ataaactctaccaatcaacaggaagctgcggttgctaccaaccggaagggtatagtattc
tttcacttggaagatgagattccttttagtggcgaagcagaccttttgtggaccaaggcc
gattggccacaaaatggatgggcaggttcagaatccacccctgctcctacttgtgtttct
cctggtgttggccttgggaggaaaaaaggggcacacctcggtcttggtggagcaactgtt
ggtatggattcttcagcttggcctagcagagacttgacaggcaatggagctttagcaatg
ctaggttatgctggtattggtgcctctggattgggttgggaaactcaacaagactttgag
gattttgttgatccacctgctactttggagaatacaagttccagggctttttctagtcat
ccaatgaggtctttcttcttggttggttcaagcaatacacacatttacttgtgggagttc
aataaggacaaagctactgctacatatggggtgcttcctgctgcgaatgtccctccacct
tatgctcttgcgtcaatttcagctttacagtttgaccactttgggcatcgttttgccagt
gctgcattagatggaaccgtctgcacatggcagctggaggtaggaggaaggagcaatgtt
cgtccaacagaatcatccctctgctttaatggccaagcatcggatgtcacgtacgtttcc
tctagtggatcaataatagccgtggctggatatagctctaataatgttaatgtggttata
tgggatactttagctccaccttcaacttctcgagcttctattttatgtcatgaaggtggt
gcgcgctccctttctgtatttgacaatcaactaggaagtggttctgtttcccctctaatt
gtgactggtggtaaaggcggcgatgttggacttcacgacttccgctatatagctacagga
aaggcgaaaaggcacaggcgttctgatagcattgggcatagctctctcacatctttgaat
tatgacaaggaccataatgttgatgggatgctttggtatattccaaaggcacattcagcg
agtgtcacaaaaatagctaccatcccaaataccagcttgtttttgactggaagcacagat
ggagatgtcaagctctgggatgccgagagctcaaagttattacatcactggtctaagcta
catgataaacacacttttctccagtcaggctctcgtggatttggcggcgttgttcgggct
gctgttacggacattcaagttgttccacatggttttcttacgtgcggtggggatggaaat
gtaaagcttgtacagttgaaaagtcacctgcgtggcttcggggatgagtaa
DBGET
integrated database retrieval system
