Medicago truncatula (barrel medic): 25500742
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Entry
25500742 CDS
T01716
Name
(RefSeq) protein SUPPRESSOR OF PHYA-105 1 isoform X1
KO
K16240
protein suppressor of PHYA-105 1 and protein SPA1-related 2
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
25500742
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25500742
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Multi subunit type E3 associated proteins
25500742
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
WDR55
Pkinase
Beta-prop_EIPR1
EIF3I
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_HPS5
Beta-prop_EML
Beta-prop_WDR35_TULP_N
WD40_RFWD3
PK_Tyr_Ser-Thr
Beta-prop_IFT140_1st
WD40_like
Motif
Other DBs
NCBI-GeneID:
25500742
NCBI-ProteinID:
XP_013444681
UniProt:
A0A072TNB4
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Position
8:10366855..10372057
Genome browser
AA seq
964 aa
AA seq
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MTANSGRGTEEHKRKINDPLPRSPRLCTPIRKENVIGNENNILTRNFASLAGSGPPSTSF
CSTTDPKHIVEKLHVRNNKNLNVALGIPPHNFRQHQRNQLAIESKYNNSLSRKIAQKSLR
LSKGQKGIDSRKNLNHEQYKAFANIGNMDNTHFVSSKMQSSSATSSYPQLLGEKTVKGKG
ILHNVMSGAECFNDGLNLRAWMKSESHKVKKSERLYIFKQILELVDFAHSQGFVLEDIKP
SCFVLSPLNKIKYIGSYSQHVFDDQKSCFTVFKSCLKAIMTCNGTRKMPWEQDNCACQNL
SAKKQKLCEEKTSLKEQHHFNCIHGCDTKMDMETRVNKERLWLDDSSYQHAFAEEKQFIS
ETIEFEEKWYSCPEVLNEEACTFSSNVYSLGVLLFELLCNIESLEAHSTVMFDMRHRILP
PKFLSQNAKDAGFCLWLLHPEPSSRPNTRMILESEFIRELEASNSGDNNVIVSEDDVADT
QELLHFLISVEEEKKKQEAKLAEELHCLNEDIKEVEGNHSYGSDSAFPSSQLNYLPYHDS
SSKIISRSFPSSFVDEAKFMNNISQLENSYFSMRFQGPLKEAAAAKSSDKSVMETRWRLP
HLENVGNGPKRIQGSIGCLGPFYEGICKFARYSKFEERGTLRNSDLLSSANVICALSFDR
DEDYIAAGGISKKIKIFDLNAISSDSTDIQYPVVEMSNKSKLSCVCWNSYIKNHLASTDY
DGVVQMWDAGTGQPLSQYMEHQKRAWSVHFSASDPKMFASGSDDCSVKLWNISERNSIGT
IMSPANVCCVQFSEYSTNLLFFGSADYKVYGYDLRNTKIPWCTLPGHGKAVSYVKFIDAQ
TVVSASTDNSLKLWDLKKTSSAELSSDACDLTFRGHSNGKNFVGLSVLDGYIACGSESNE
VYCYHKSLPVPMASHKFESIDPISGHSNSNDNNGQFVSSVCWRKKSNMLVAANSVGIVKL
LQMV
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgactgcaaatagtgggagaggaactgaagagcataagaggaaaatcaatgacccttta
ccaaggtcacctagattatgcacacctattaggaaggaaaatgtgattggtaatgagaat
aatattttaactagaaattttgcttccttagctggatctggacctcctagtactagtttt
tgttccaccacagatcctaaacacattgttgaaaaattacatgttaggaataataagaac
ttgaatgtggctttaggtatccctccacataattttagacagcatcagagaaatcaatta
gctattgagtctaagtataataatagcttgagtagaaaaattgcacagaaatcactcaga
ttaagcaaaggacaaaagggaattgattctagaaagaacttgaatcatgaacaatataag
gcttttgctaatataggcaatatggataatacacattttgttagcagtaaaatgcaaagt
tcttctgctacatctagttatcctcaattgttaggagagaaaacagtgaagggaaaggga
attcttcataatgtgatgtctggcgcagaatgttttaacgatggactcaacttaagagcg
tggatgaagtctgaaagtcataaagtgaagaaatcagaaaggctgtatatatttaaacag
attttggaattggttgattttgcacactctcaaggatttgtcttggaagacataaaacca
tcttgtttcgtcttatcgcctttgaataaaattaaatacattggttcatatagccaacat
gtgtttgatgaccaaaaatcatgtttcaccgtatttaagtcatgccttaaggctatcatg
acctgcaacggaacaaggaaaatgccttgggaacaagataactgtgcttgccaaaatttg
agtgcaaagaagcaaaagctatgtgaagagaaaacatctcttaaggagcagcatcacttc
aactgtattcatggctgtgacacaaaaatggacatggaaacaagggttaataaagaaagg
ttgtggcttgacgattcgagttatcaacatgcttttgcagaagaaaaacagtttatttct
gaaacaattgagtttgaagagaaatggtattcttgtccagaagtgctcaatgaggaagct
tgtacattttcatcaaatgtttatagccttggagttcttctttttgagttgctgtgcaat
attgagtcattggaagcacattcaactgtgatgtttgatatgcgtcatagaatcttaccg
ccaaaatttctatcacaaaatgcaaaggacgctggtttttgtctatggcttctgcaccct
gaaccgtcttctcgtcccaataccaggatgattttagaatctgaatttatacgcgaatta
gaggcatcaaactctggtgataataatgttatagtatctgaagacgatgtagctgacaca
caggaattactgcattttctaatttcagttgaagaagaaaagaaaaaacaggaagctaaa
ttggcagaagagctacattgtttgaacgaagatattaaggaggtagaaggaaatcattcg
tatggaagtgattcagcatttccatcgtcacaattgaactatctaccttatcatgattct
tccagtaaaattattagtagatcttttccaagttcatttgttgatgaagcaaaatttatg
aataacataagtcagctagagaatagttacttctccatgagattccaaggcccgctcaag
gaagctgcagccgccaaaagcagtgataaaagtgtgatggaaaccagatggagattgcct
catttagagaatgttggtaatgggccaaagagaattcaaggttctattggttgtctagga
cctttctatgaaggtatatgcaaattcgctcgttacagcaagtttgaagagcgcggaaca
ttgagaaacagtgatcttcttagttctgccaatgtgatatgtgccttaagttttgaccgt
gatgaagactacattgcagccggtggaatttcaaagaaaataaagatatttgaccttaat
gctatttcaagtgattctacagacattcagtaccccgttgtcgagatgtcaaacaaatca
aagctcagttgtgtgtgctggaacagttatataaaaaaccatctggcatctactgattat
gatggtgtggttcagatgtgggatgcaggcactggtcagccactgtctcaatacatggag
caccaaaagagagcttggtctgttcacttttcggcgtccgacccaaaaatgtttgccagt
ggaagtgatgactgttctgtcaaactatggaatatcagcgagagaaattctataggaacc
ataatgagtccggcaaatgtatgttgtgttcagttctctgaatactccacaaatctttta
ttttttggatcggctgattacaaggtgtacggttatgatcttcgtaacactaaaattcct
tggtgtacgttacctggtcatggaaaagctgttagctatgtaaaatttatagatgcacaa
acagttgtgtctgcttccactgataactctttgaagttatgggacttaaagaaaactagt
tcagccgagttgtcatctgatgcttgtgacttaacctttagaggtcatagtaatggaaag
aatttcgttggtttatctgttttggatggatacattgcatgtggttcagaatctaatgag
gtttactgttatcacaaatctctaccagtgccaatggcttctcacaaattcgagtcaatc
gatcccatttctggtcattcaaacagtaatgataacaatggacaatttgtttctagtgtc
tgctggaggaagaagtctaacatgcttgttgcagccaactcagttggaattgtgaaacta
cttcagatggtgtga
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