Medicago truncatula (barrel medic): 25500763
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Entry
25500763 CDS
T01716
Name
(RefSeq) adenine DNA glycosylase isoform X1
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
25500763
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtr03400
]
25500763
Enzymes [BR:
mtr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
25500763
DNA repair and recombination proteins [BR:
mtr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
25500763
Prokaryotic type
25500763
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
Motif
Other DBs
NCBI-GeneID:
25500763
NCBI-ProteinID:
XP_013444702
UniProt:
A0A072TMT2
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All DBs
Position
8:complement(10492941..10497766)
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AA seq
477 aa
AA seq
DB search
MFLCFCLPSPTSTLSLISNINMSEKTLNKNKTRKRNINSVTKKTPTLVKTEDIEDSPSFF
SKDETHKLRTVLLDWYDRNQRVLPWRTTLNDEHEEEEVEKRAYGVWVSEVMLQQTRVQTV
IAYFNRWMLKWPTIHHLAKASLEEVNEIWAGLGYYRRARFLLEGAKQIVAEGGSIPKTAS
TLRKIPGIGDYTSGAIASIAFKEAVPVVDGNVIRVIARLRAISENPKDSVIIKRFWEIAA
QLVDPLRPGDFNQALMELGATVCTPLNPSCSSCPASEFCHALSIAKDNSTAAVTDYPIKV
VKVKPRSDFCAVCVVELLGGENQSSSRFVLVKRPDEGLLAGLWEFPSVLVDGETAPLARR
KATDCFLKKSLKIDIRKTCDVVLREDVGEFVHIFSHIRLKLYVELLVLQLKGTVGDLLKS
KDDETTTWKCVESNALSNMGLTTSVRKVYDMVKKFKQKRLPSNLVPTKKRTRTTKKN
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttgtttttgtttaccatcaccaacatcaacactgtcactaatttccaacatc
aacatgtcagagaagaccttaaacaagaacaagacccgaaagcgtaacattaatagtgtc
accaaaaagacaccaactttggtaaaaacagaagacatagaagattcaccatcattcttc
tccaaagatgaaacccataaactgagaacggttttattggattggtatgatcgtaaccaa
agggttcttccttggagaacaacgttgaatgatgaacatgaagaagaagaagttgaaaag
agagcttatggtgtttgggtttcagaggttatgttacagcaaacaagggttcagactgtt
attgcttattttaaccgttggatgcttaaatggcccaccattcatcatctcgctaaggct
tctcttgaggaagtaaatgagatttgggccggtttgggatactatcggagagctcgtttt
cttttagagggggcaaaacaaatagttgcagaaggaggtagtattccaaaaacagcttct
acgttacgaaagattcctggaattggagattatacatctggtgcaatcgcatctatagca
ttcaaagaggcggtacctgttgtcgatggaaatgtgataagggtgattgccaggctaagg
gccatttctgaaaatccaaaagactcggtaatcattaagagattttgggaaatagctgct
cagttggtcgatcctcttcgtccaggagatttcaatcaggctctcatggaactcggtgca
actgtatgcacccctttgaacccaagctgttcgtcgtgtccagcatcagaattttgtcac
gcactatcaattgctaaagataatagtacggcagcagttacagattatccgattaaggtt
gtgaaggttaaaccaagatccgatttttgtgctgtatgtgttgttgaattacttggaggt
gaaaaccaatctagcagcagatttgttctcgtaaaaaggcccgacgaaggattgcttgcc
ggtttatgggagtttccgtctgtcttagtagatggagaaactgctccattagctagacga
aaagcaaccgattgtttcttgaaaaaaagtctcaaaattgacatcagaaagacctgcgat
gttgttttgagggaagatgtcggggaatttgttcatatttttagtcacattcgcctcaag
ttgtatgttgagttgctggtgctacaattgaaagggacagtaggtgatttgttgaaaagc
aaggacgatgaaactacaacttggaaatgtgttgaaagcaatgctctctcaaatatggga
ctgacgaccagtgtaagaaaggtgtatgacatggttaaaaaatttaagcagaaaagactt
ccttctaaccttgtgccaaccaaaaagagaactagaacaaccaagaaaaactag
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