Medicago truncatula (barrel medic): 25501756
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Entry
25501756 CDS
T01716
Name
(RefSeq) glutamate-rich WD repeat-containing protein 1
KO
K14848
ribosome assembly protein RRB1
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mtr03009
]
25501756
Ribosome biogenesis [BR:
mtr03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
25501756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
Beta-prop_RIG_2nd
WDR55
WD40_WDHD1_1st
CAF1C_H4-bd
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
Beta-prop_EML_2
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_EML
EIF3I
ANAPC4_WD40
Beta-prop_SPT8
WD40_MABP1-WDR62_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
Beta-prop_Vps41
Beta-prop_WDR75_1st
Beta-prop_IFT122_1st
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
25501756
NCBI-ProteinID:
XP_013446579
UniProt:
A0A072TTT6
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Position
8:complement(38775229..38780910)
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AA seq
469 aa
AA seq
DB search
MTRGIKHRQKAKSKNKKRSESSSAAAPPQVPVKVWQPGVDKLEEDEELQCDPSAYNSLHA
FHIGWPCLSFDILRDTMGLVRTEFPHTVYFITGTQAEKPSWNSIGIFKVSNISGKRREPV
PKRETDDSEMDGEDSDSEDDSEDEEEGGAGGPTLQLRKVTHEGCINRIRSMAQNPHICAS
WAESGHVQIWDMSSHLNALAETETDGVQGVDAVQAPLQKFKHKDEGYAIDWSPLVPGRLV
SGDCNNSIYLWEPTSAATWNIEKTPFTGHTDSVEDLQWSPTEPHVFASCSVDKSIAIWDT
RLGRSPAASFQAHKADVNVLSWNRLASCMLASGSDDGTISIRDLRLLKEGDSVVAHFEYH
KHPITSIEWSPHEASSLAVSSADNQLTIWDLSLEKDEEEEAEFRAKTQEQVNAPEDLPPQ
LLFIHQGQKDPKELHWHTQIPGMIVCTAADGFNVLMPSNIQSTLPSEAA
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgactcgcggcataaaacatcgtcaaaaggcaaagagcaagaacaagaaacggagtgaa
tcatcttcggcggcggcgccgccacaggttccggtaaaagtgtggcaacctggtgtggat
aagttggaagaagatgaagagcttcagtgtgatccttctgcttacaactctcttcatgct
tttcatattggatggccttgccttagcttcgatattttacgtgacaccatgggtttagtt
cgaacagaatttccacacacagtgtatttcattacagggacacaggctgagaaaccttct
tggaattctattgggatttttaaagtatccaatatttctgggaagagacgtgagccggtg
cctaaacgtgaaactgatgactctgaaatggatggtgaggatagtgatagcgaggatgat
agtgaagacgaagaagaaggtggtgccggtggtcctactttgcagttgcggaaggtaact
cacgaaggttgtattaaccggatacgctccatggcacaaaatccccatatatgtgcatct
tgggcagaatctggtcatgtgcagatctgggacatgagctctcatcttaatgctctagca
gagacagaaaccgatggtgtccaaggagttgatgcagttcaggctccactacaaaaattt
aagcacaaagatgaaggctatgctatagactggagtcctcttgttccagggaggcttgta
tccggggattgcaataatagtatttatctgtgggagcctacatctgctgcaacatggaat
attgaaaaaactccttttactggacatactgatagtgttgaagatctgcaatggagccct
acagaacctcatgtttttgcttcttgctctgtggataaaagcattgcaatatgggatact
cgtttggggaggtcaccagctgcgtcttttcaagcacacaaggctgatgtgaatgtattg
tcatggaacaggttggctagttgtatgttggcgtcgggtagtgatgatgggactatatct
attcgtgatctcagactgcttaaggaaggagattccgtggtagcgcattttgaataccat
aagcatccaatcacatccattgagtggagtccacacgaagcttcttcattggctgtttca
tccgctgataatcaacttacaatatgggacctttctttggaaaaggacgaggaagaggag
gctgaatttagagctaaaacccaagaacaagtaaatgctcctgaagatctgcctccccaa
ctattgtttattcaccagggacaaaaagaccccaaagaactgcattggcacacacagatt
cctggaatgatagtatgtactgcagcagatggattcaacgtcctcatgccttcaaatatt
cagagcaccttgccatcagaagctgcatga
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