Medicago truncatula (barrel medic): 25501949
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Entry
25501949 CDS
T01716
Name
(RefSeq) RING-H2 finger protein ATL78
KO
K19040
E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:
2.3.2.27
]
Organism
mtr
Medicago truncatula (barrel medic)
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25501949
Enzymes [BR:
mtr01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
25501949
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
ATL proteins
25501949
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-rbx1
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_UBOX
FANCL_C
zf-RING-like
zf-RING_5
Prok-RING_1
PHF5
zf-RING_16
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
25501949
NCBI-ProteinID:
XP_013446862
UniProt:
A0A072TTS2
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Position
8:complement(43002313..43003182)
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AA seq
225 aa
AA seq
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MYASISFTTQIFNELLVESHIRRLLIQNPVDHQSLTNSPTLTNNHNSTDSNFGDREFDSK
VVMILAVILCVFICSLALNSIIRCALRFSNVAINNDSSSSNSNSSLQSVNKGIKKKALKA
FPTVSYSTDLKLPSLDAECMICLSEFTKGEKVRILPKCNHGFHVRCIDKWLKEHSSCPKC
RQCLLETCRKIGGSQVQPIVLPVPEIIIRIEPLEHEALERNYREI
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcttctatttcctttactacacaaatattcaatgagcttcttgtggaatctcac
ataagaaggttactcattcaaaacccagttgatcatcaatcactaaccaactcccctact
ttaacaaacaaccataattcaacagactcaaattttggagatcgtgaatttgattcaaaa
gttgtgatgatacttgcagtcatattatgtgtttttatttgctcacttgcattaaactcc
attatcaggtgtgccttaaggttttcaaacgtagccatcaacaacgactcttctagttcg
aacagcaattcttcgcttcaatcggtcaataaaggaatcaagaagaaagctcttaaggca
tttcccacagtgagctactcaactgacttgaaactaccaagtttggacgcagaatgtatg
atatgtctctcagagttcacaaagggtgaaaaggtgcgcattttgcctaaatgcaaccat
ggatttcatgttcgttgcattgacaaatggctaaaagaacattcatcatgtccaaagtgc
agacaatgtcttcttgaaacttgtcgaaagattggtgggtcgcaggtgcaaccaattgtg
ttgccagtgccagaaattattataaggatcgaaccactagagcacgaagctttggaacgt
aactatagggaaatataa
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