Medicago truncatula (barrel medic): 25502078
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Entry
25502078 CDS
T01716
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
25502078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mtr04121
]
25502078
Ubiquitin system [BR:
mtr04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
25502078
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_4
LRR_At5g56370
LRR_6
DUF7885
F-box-like
F-box
LRR_8
Motif
Other DBs
NCBI-GeneID:
25502078
NCBI-ProteinID:
XP_013447073
UniProt:
A0A072U5G2
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Position
8:complement(45333565..45337009)
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AA seq
573 aa
AA seq
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MEECKREKDEVLKQVLGTVKSRKDRNSASLVCKQWYNAERLSRRNVFIGNCYSVTPEILT
RRFPNIRSITLKGKPRFSDFNLVPENWGADIHSWLVVFAEKYPFLEELRLKRMVVTDESL
EFLAFSFHNFKALSLLSCEGFSTDGLAAVAANCKNLTELDIQENDIDDKSGDWLSCFPES
FTSLEVLNFANLNNDVNIDALEKLVGRCKSLKTLKVNKSVTLEQFQRLLVLAPQLCELGS
GSFSQDLTCQQYLELESAFKNCKSLHTLSGLWVASASAQYIQLQVLYSACTNLTFLNFSY
ALVDSEDLTDLLVHCPNLRRLWVVDTVEDKGLEAVGSYCPLLEELRVFPADPFDEGVVHG
VTESGFIAVSEGCRKLHYILYFCHQMTNDAVATVVQNCPDFTHFRLCIMTPNQPDYLTNE
PMDEAFGAVVKTCTKLQRLSVSGYLTDLAFEYIGKYAKNLETLSVAFAGSSDLGMQCVLA
GCPKLKKLEIRDCPFGDAALLSGLEKYESMRSLWMSDCQVTMNGCRLLAKEKPRLNVEVI
KEEGSGDSQAEKVYVYRSVAGPRRDAPLFVLTL
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atggaggagtgtaagagagagaaagatgaagtgttgaaacaagttctcggaacagtgaag
tcacgcaaagacagaaattcagcttctttagtttgcaaacagtggtacaacgctgaaaga
ttgtcaaggaggaatgttttcataggtaactgttattctgtgactcctgagatcctgaca
cgtaggtttccaaacataagaagtattacactcaaagggaagccacgtttctctgacttc
aacttggttcctgaaaattggggtgctgatattcattcatggttggttgtttttgctgaa
aagtacccattccttgaggagttgaggcttaagagaatggttgttactgatgagagttta
gagtttttggctttttcttttcataatttcaaagcactttctctactgagctgtgaagga
tttagcactgatggcttggctgcagttgccgctaattgcaagaatttaaccgagcttgac
atacaagagaatgacatcgatgacaaaagtggtgattggttgagttgcttcccagaaagc
tttacatcattggaagtattgaactttgctaacctaaacaatgatgtaaatatcgatgcg
cttgagaaacttgtcggtaggtgcaaatcattgaagactttgaaggttaacaaaagcgta
acgcttgaacagtttcaaagacttcttgttcttgcccctcagttatgtgagcttggcagt
ggctcattttcacaagatctgacatgtcagcagtatttagagctcgaaagcgcgttcaaa
aattgtaagagtcttcacaccctttctggtttatgggtggcttcagcatcagcacagtat
atccaactccaagttctatactctgcatgcacaaatctgactttcttgaattttagttat
gctcttgttgacagtgaagatcttactgatcttcttgttcattgtcctaatcttcgacgc
ctttgggttgtagacacagttgaagacaagggactggaagctgttggatcatattgtcca
ttgctcgaggagctacgtgtttttcctgcagatccctttgacgagggcgttgtgcacggg
gttactgaatcaggttttattgctgtctctgaaggatgccggaagcttcactacatcctc
tacttttgccatcagatgacaaatgatgctgttgctactgttgtgcaaaactgtcctgac
ttcactcatttccggctctgcatcatgacccctaatcagccagattacctgacgaatgaa
cctatggatgaggcctttggagcagttgttaagacctgcactaaactccaaaggctttct
gtatcaggttatctaactgacctcgcatttgagtatataggtaagtatgccaaaaacttg
gaaacactttcggtggcttttgccggaagcagtgacttggggatgcagtgtgtacttgct
ggctgtccgaagctgaaaaaacttgagataagggactgtccattcggcgatgcagcgctt
ttgtctggtttggagaagtacgagtcaatgaggtcactttggatgtcggactgccaagta
actatgaatggatgtagattgttagcaaaagaaaagccgaggttgaatgttgaagtaatt
aaggaagaaggaagcggtgatagtcaggctgaaaaagtttatgtttatcgttctgttgcc
ggcccaagaagggatgcccctctatttgttctcactctctga
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