Medicago truncatula (barrel medic): 25502179
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Entry
25502179 CDS
T01716
Name
(RefSeq) long chain acyl-CoA synthetase 4 isoform X1
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00061
Fatty acid biosynthesis
mtr00071
Fatty acid degradation
mtr01100
Metabolic pathways
mtr01212
Fatty acid metabolism
mtr04146
Peroxisome
Module
mtr_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
25502179
00071 Fatty acid degradation
25502179
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
25502179
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mtr01004
]
25502179
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mtr04147
]
25502179
Enzymes [BR:
mtr01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
25502179
Lipid biosynthesis proteins [BR:
mtr01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
25502179
Exosome [BR:
mtr04147
]
Exosomal proteins
Exosomal proteins of breast milk
25502179
Exosomal proteins of breast cancer cells
25502179
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
DUF643
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
25502179
NCBI-ProteinID:
XP_013447190
UniProt:
A0A072TUV3
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Position
8:complement(46061420..46068194)
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AA seq
659 aa
AA seq
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MAEDKSFIVEVEKARDAKDGRPSMGPVYRSCFTKDVSPPPIQGLDTCWDVFRTAVEKYPT
NPMLGRREIVNGDPGKFNWQTYKEVYDLVIKIGKSIRACGYGEGVKCGIYGANCPEWIMS
MEACNAHGLYCVPLYDTLGAGAVEFVISHAEVSIAFVEEKKIPELLKTFPKAAEYLKTIV
SFGKVSEEQKQEVEKLGVKIYSWDEFLEVGHDKNFDLPVKKKSDICTIMYTSGTTGDPKG
VLISNENIITLLSGMKKILGSCNEQMHEKDVYISYLPLAHIFDRIIEEGIIWSGAALGFW
RGDIKLLMEDIAELKPTIFCAVPRVLDRVYTGLTEKINNGGFVKQTMFNWAYTYKLHSME
RGQKHETAAPLMDKLVFSKVKQALGGNVRIVLSGAAPLSKHVEGFLRVVTCAHILQGYGL
TETCAGSFVTIPNEINMLGMVGPPLPYIEVCLESVPEMGYDALATKPRGEICIKGGTVFA
GYHKREDLTKEVMIDGWFHTGDIGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENLENIYV
QVNAIESIWIYGNSFEHFLVAVVNPSKKAVEDWAQANDMKMDFNSLCEDSKAKHYILGEL
LKIAKEKKLKGFEFVKAVHLDPVPFDMERDLLTPTFKKKRPQLLKYYQNIIDEMYKTAK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggctgaagataaatcattcatcgttgaggttgagaaagctagagatgccaaagatggt
aggccatctatgggtcctgtttatcgtagctgtttcactaaggatgtctctcctcctccc
attcaaggtctcgatacatgttgggatgttttcaggactgctgttgagaagtatccaaca
aatccaatgctgggtcgccgtgaaatagtgaatggggatcctggcaaattcaattggcaa
acttacaaagaagtgtatgacttggtgatcaaaattgggaagtccattcgtgcttgtggt
tatggggaaggagtaaaatgcggcatttatggcgccaattgtccggaatggattatgagc
atggaggcctgcaatgctcatggactttattgtgttcctttatatgataccttaggtgcc
ggggctgtggagtttgttatatctcatgcagaggtctcgatagcatttgtcgaagaaaag
aagatacctgagctattgaagacatttccaaaggcagcagagtatctcaagacaattgtg
agctttggaaaagtttctgaagaacaaaagcaagaagttgagaagttgggggtgaaaata
tattcatgggatgaatttttagaagtgggtcatgataagaattttgatcttcctgtaaaa
aagaaaagcgacatatgtacaataatgtacacaagtggaacaaccggtgatcccaaggga
gtattgatatccaacgagaacattattacacttttatctgggatgaaaaagatattaggt
agttgcaatgaacaaatgcatgagaaagatgtatacatatcataccttccacttgcacac
atctttgacaggattattgaagagggaatcatatggagtggtgctgcattaggtttctgg
cgaggggatatcaaattgttgatggaagacattgctgagttaaaaccaactattttttgt
gccgttccccgtgtgcttgatagagtgtacacaggtttgacagagaagattaataatggg
ggttttgtgaaacagacgatgttcaattgggcctatacatacaagttgcatagcatggaa
agagggcaaaaacatgaaacggcagctccattaatggacaaacttgtattcagtaaggta
aaacaagctttagggggtaatgtacgtattgttttgtctggagctgcgcctctatcgaaa
catgttgaaggtttcctgcgtgttgtgacttgtgctcacatcttacaaggatatggtctt
actgaaacatgtgctggatcctttgtaacaataccaaacgaaataaatatgcttggtatg
gtgggacctcctttaccatatattgaagtgtgtctggagtctgtacctgaaatgggatat
gatgcacttgcaaccaaaccaagaggagaaatctgtattaagggtggtaccgtttttgct
gggtatcataaacgtgaagacctcaccaaagaagttatgattgatggatggttccataca
ggagatattggagagtggcaacctaatggaagcatgaaaattatcgatcgaaagaagaat
atatttaagctttcacaaggcgaatatgttgctgttgaaaacctggagaatatttatgtt
caagttaatgctattgaatccatatggatctatggaaacagttttgagcacttccttgtt
gctgttgttaacccaagcaagaaagcagttgaagattgggctcaagcaaatgatatgaag
atggactttaattctctatgtgaagattcaaaggcgaaacattacatacttggagagctc
ttaaagattgcgaaggaaaagaagctgaaaggttttgagtttgttaaagctgttcatctt
gatccagttccatttgacatggaacgtgatcttctcacaccaacatttaagaaaaagaga
ccgcagttgcttaagtactaccagaatatcattgacgagatgtacaagacggccaaataa
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