KEGG   Medicago truncatula (barrel medic): 25502531
Entry
25502531          CDS       T01716                                 
Name
(RefSeq) UBP1-associated protein 2C
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mtr  Medicago truncatula (barrel medic)
Pathway
mtr03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mtr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25502531
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mtr03019]
    25502531
   03041 Spliceosome [BR:mtr03041]
    25502531
Messenger RNA biogenesis [BR:mtr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     25502531
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     25502531
Spliceosome [BR:mtr03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    25502531
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 25502531
NCBI-ProteinID: XP_013445530
UniProt: A0A072TQR0
LinkDB
Position
8:complement(24766187..24790533)
AA seq 445 aa
MQTIMDPTKKRKLDENGFGGESDHLKLSPSEGRKLIERFTPDQLINILQDAVVRHPDVLS
AVRAVVDPDISRRKLFIRGLGWDTTTEGLRSLFSTYGELEEAIVIVDKATGKSKGYGFVT
FLHVDGALLALREPSKRIDGRVTVTQLAAAGNSGSNTNAADVAQRKIYVSNVPPDLPGDK
LLAHFSIYGEIEEGPLGFDKQTGRSKGFALFVYKTPEGANAAVSEPVKNVEGRQLNCKLA
ITDGGKQQGMRGGPDGAQGRGNAHGNGLGMAPAAGSASGQYGASVGMGSYGGFSAGHQGQ
PPMGNHPLSSSVGGGLSSVGNQAPSSIGGAGGYGGGHYGGYSGPTAAGYGGSGGGGGGGY
GGGSGVTGPGVGAGGGHGSAGGSGGHGLASLYRLPSSGGMQAGGYPDSGHYNSSGYQNQH
HPPAGASPVPRVQPGSMYSNVPPYY
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgcaaacgataatggatcccaccaaaaagcgcaagctggacgagaacggcttcggcggc
gaatctgatcacctaaagctctccccctcggaaggccgcaagctgatcgagcgtttcacc
cctgaccagctaatcaacatcctccaagacgccgtcgtccgccatcccgacgttctctcc
gccgttcgtgcagttgtagacccagacatctcccgacgcaagctcttcatccgcggcctc
ggttgggacaccacaacagagggcctccggtcacttttttcaacctacggtgaactcgaa
gaagccatcgtcatcgttgataaggccactgggaagtcaaagggttacggttttgtaacc
ttcctccacgtggacggtgctctattagctctccgtgagcctagcaagcggattgacggg
cgcgttactgtcacgcagctggccgcagcagggaattcaggctccaacaccaacgcagct
gacgttgcccaacgtaaaatatatgtatccaatgtgccgccagatcttccaggggacaag
cttctagcccacttctcaatttatggggagatcgaggaaggtccattgggctttgataag
cagacaggaagatccaaaggcttcgctctttttgtttataagacacctgagggggcaaac
gctgccgtatcagagcccgtcaagaatgtggaggggcgccagttaaattgcaagctggca
ataacagatggtgggaaacagcaagggatgcggggtggcccggacggggctcagggtcgt
gggaatgctcatggaaatggattggggatggctcctgcagctgggtctgcgtcgggtcaa
tatggtgcttctgtgggtatgggttcttatggtgggttttctgctgggcatcagggtcag
cctccaatgggtaaccatcctttgagttcgtctgttggtggtggtttgtcttctgttggg
aatcaggctccgtcttcaattggtggagctggtgggtatggtggtggtcattatggaggt
tacagtgggccaacggcggctggctatggcggtagtggtggtggtggtggtggtggttat
ggtggaggcagtggtgtgactggtccaggtgtgggagccggtggtggacatggttctgct
ggaggtagtggtggacatggacttgcttccttgtacagattaccaagttcaggtggaatg
caagctggtggatatcctgacagtggacactataattcatcgggctatcagaatcagcat
catcctcctgctggagcatcgccggtaccaagggttcaacctggttccatgtattcaaat
gtgcctccttactactaa

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