Medicago truncatula (barrel medic): 25502565
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Entry
25502565 CDS
T01716
Name
(RefSeq) cyclic nucleotide-gated ion channel 4
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
25502565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mtr04040
]
25502565
Ion channels [BR:
mtr04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
25502565
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Paralog
GFIT
Motif
Pfam:
cNMP_binding
Ion_trans
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
25502565
NCBI-ProteinID:
XP_013445570
UniProt:
A0A072TQU5
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All DBs
Position
8:25085958..25101967
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AA seq
672 aa
AA seq
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MATTTTEQDTSSALHMHDTATDDATEDSEPENYLDDEDDDEEEEQQPVNYRRSISSTSIS
GAVDPRAKWVQEWNRVFLLVCAAGLFVDPLFFYALSISDSCMCLFIDGWFAVTVTVLRCM
TDALHFWNIFLRFKTAKRSSLTFASHSATADGRRLVALAYLKSRRGFFFDLFVILPIPQI
VLWVAIPSLLEQGSVTLVMTIFLIVFLFQYLPKIYHSVCHLRRTQNLSGYIFGTVWWGIA
LNMIAYFVASHAAGACWYLLGIQRASKCLKEQCYKTNGCGMNLLSCHKPMYYGSTSLLNK
DMARMAWAGNREARSTCLNSPDSFNYGAYKWTVQLFTNENRLEKVLFPIFWGLMTLSTFG
NLESTTDWLEVVFNIIILTSGLLLVTMLIGNIKVFLHATTSKKQVMQLRIRNVEWWMRKK
HLPQGFRQRVRNYERQRWAAMRGVDECEMTKNLPEGLRRDIKYHLCLDLVRQVPLFQHMD
ELVLENICDRVKSLIFTKGETIAREGDPVQRMLFVVRGHLQSSQVLRDGLKSCCMLGPGN
FSGDELLSWCLRRPFIERLPLSTSTLVTLETTEAFGLEAEDVKYVTQHFRYTFVKEKVKR
SARYYSPGWRTWGAVAIQLAWRRYRHRLTLNSLSFIRPRRPLSRCSSLGEDRLRLYTALL
TSPKPNQDDFDF
NT seq
2019 nt
NT seq
+upstream
nt +downstream
nt
atggccaccacaacaacagaacaagacacctcaagtgctttacacatgcacgacactgca
accgacgacgcaactgaggacagtgagccggagaactacctagacgacgaagatgatgac
gaggaagaagagcagcaaccggtgaattatagaaggtcaatatcttcaacaagtatcagt
ggagctgtggacccaagagcaaagtgggtgcaagaatggaatagagttttcttgctagta
tgtgcagcagggttgtttgtggatccacttttcttctatgctctttccatcagtgattca
tgtatgtgtcttttcatcgatggatggttcgcagtcactgtaacggtgctccgttgcatg
actgatgctttgcacttttggaatattttcctccgcttcaagacggcgaaacgcagctca
cttacatttgccagccattcggccaccgcggatggccgccgcttggtcgctcttgcttat
cttaagtcccgccgtggcttcttctttgacctctttgttattcttcctatacctcagatt
gtgctttgggtggctattccttctttgttggagcaaggttcagttacattggtgatgaca
atatttttaattgtatttctgttccaatatcttcccaaaatttatcactcagtatgccat
ttgcgacggacacaaaacctatctggctacatttttggaactgtttggtggggtattgcc
cttaacatgattgcgtattttgttgcttcccatgctgcaggggcatgttggtacttattg
gggatccaaagagcatccaaatgtctgaaagagcaatgttataaaacaaatggttgtggc
atgaatctcctttcttgtcataagccaatgtattatggaagtacaagtttgttgaacaaa
gatatggcaagaatggcatgggcagggaatagggaagcaaggtctacatgcttaaatagt
cctgatagcttcaattatggagcttataaatggactgttcaacttttcactaatgagaac
cgattagaaaaagtacttttcccaatcttctggggcttaatgactctaagcacttttgga
aacctcgagagcacaacggattggctagaagtagttttcaacatcataatcttgactagt
ggacttcttctagtcactatgttgatcggaaacatcaaggtatttttgcatgcaacaaca
tcgaagaagcaagtgatgcaattgaggataagaaatgttgaatggtggatgaggaaaaag
catttaccacaggggtttcgacaacgtgtgcgtaactacgaaagacaacgttgggctgct
atgcgtggggttgatgaatgtgaaatgaccaaaaatcttcctgaaggtttaagaagagac
attaaataccatctttgtttagatttggtgagacaggtgccattgtttcaacatatggat
gagctggttctagagaacatatgtgaccgagtgaaatctctaatattcactaagggagaa
acgatagcaagagaaggagacccagttcaaagaatgttatttgtagtgaggggtcatctt
caaagcagccaagtattaagagacggattgaaaagttgctgcatgttaggaccaggaaat
ttcagtggtgacgagctcctttcatggtgtttgagaagacctttcatagagcgtcttcca
ctatcaacatcaacacttgtcacacttgaaacaacagaggcttttggtcttgaagctgag
gatgtgaagtatgtcacacaacatttcaggtacacgtttgtgaaggaaaaggtgaagaga
agtgctaggtattactcaccagggtggagaacttggggtgctgtggccatacaattggca
tggagaaggtacagacataggttaactttgaactcattgtcgtttataagacctagaaga
cccttgtcaagatgttcttcattgggagaagatagacttcgactctacacagctttgtta
acttcaccaaagcctaatcaagatgatttcgacttttga
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