Medicago truncatula (barrel medic): 25502748
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Entry
25502748 CDS
T01716
Name
(RefSeq) DNA ligase 1
Organism
mtr
Medicago truncatula (barrel medic)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
DNA_ligase_A_C
RNA_ligase
HTH_36
DUF7070
ER
HVO_A0114
HTH_CLF_N
Motif
Other DBs
NCBI-GeneID:
25502748
NCBI-ProteinID:
XP_024627749
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Position
8:complement(26825431..26832782)
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AA seq
713 aa
AA seq
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MSGAKKNQPPLKKTKTHHLQSTPSKSIRTFFQPLNSPIPPKNPDTESPIKLPHQTSTSST
SSPSSSSSSTNVVEVKKRISLLKKTPSEFDHSSVAWWKKGEPVPFLFLSLAFDMIKEEKG
RNAMSDIGCNVLRTVMHTTPGDLLPVVYLFSNRIAPPYQGLEMGVGKAAVIKTLAEACGR
TEKDVKEHYKKLGDLGLVAQASHLSQTLQKSDALTITKVFNTFHLIAKESGKDSQKKKNN
LIKSLLHASTDCEPLYLVRLLLVKLRIGYAEQTLLSALGQAAVYTEEHSKPPPGIQSPLE
EATKIVKQAYSVLPDYDKIISAMLTDGVWLLAKTCNFTPGIPVEPMLSEKITSVSEALNK
LRNAELICEYKYDGERAQIHYKENGSVEIYSRSSERNTGKFPDVVAAVSRLKKKNVSSFV
LDCEIVAYDRKKQRILPMQVLSTRARKDVAVSNIKVDVCVFPFDLLHLNGQALLEENLKI
RRKHLYASFEEESGFLQFSMSLISNDAKEIQKFLDKSVDASCEGLIFKTLDKDSTYQPSE
RNWLKLKKDYMKTIGDTLDLVPIGAFHGQGKRAGVYGSFLLACYDVDTQEFQTISKTGTG
FKDEDLEESSARLRTNLIPKPKACYKHAEKDKPDVWFEASEVWEVKVSDLTISPDYQAAV
GKVHSNKGISLRMPRLVRFRPDKAPEQATSSERIAEMYNAQKHNHPDKSKKKN
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgtccggcgccaagaaaaaccaacctcctctcaagaaaaccaaaactcatcaccttcaa
tccactccctccaaaagcatacgtacattctttcaaccactcaacagccctattcctccc
aaaaaccctgatactgaatctcctatcaagcttcctcaccaaacatcaacttcttcgact
tcttctccatcttcttcgtcctcttccaccaatgttgttgaagtgaagaaacggatttca
cttttgaagaagacaccgtcggagtttgatcatagctcggttgcatggtggaagaagggt
gaaccggtgccgtttttgtttctctcgttggcgtttgacatgatcaaggaagagaaaggg
aggaatgcgatgtcggatattggttgtaatgtcttgaggacagtgatgcatactacgcct
ggtgatttattaccagttgtgtatctattttcaaacaggattgctccaccgtatcaaggt
ttagaaatgggagttggtaaagctgctgttattaagacacttgctgaggcatgtggaagg
actgagaaagacgttaaggagcactataagaaattaggtgatttggggttagttgctcaa
gctagccatttgtctcagacgctgcagaagtctgatgcattgactattaccaaggttttc
aatacctttcaccttattgccaaggaatctggaaaggacagtcaaaagaagaaaaataat
cttattaaatcgcttcttcatgcttcgactgactgtgaacctttatatctagtccgttta
ctactggtgaagttgcgaattggatatgccgagcagactctcttatctgcattgggccaa
gctgcagtgtacactgaagaacattctaaaccgcctcctggaattcagtctcctttagaa
gaggctacaaagattgtcaaacaggcctattctgttctccctgattatgacaaaataata
tctgcaatgcttactgatggtgtatggctacttgcaaagacttgtaactttactcctggt
attccggttgagcctatgctgtcagaaaaaatcacaagtgtatctgaagctctgaataag
ttacggaatgcagagttgatttgtgaatacaaatacgatggagaacgtgctcagatacat
tacaaggagaatggctcggtagagatttacagtagaagctcagaacgtaacactgggaag
tttcccgatgttgtcgctgcagtttcaaggttaaagaaaaaaaatgtgtcatcgtttgtt
ctagactgtgaaattgttgcatatgatcgtaaaaaacagagaatccttcctatgcaggtg
cttagtactcgggcaagaaaagatgtagccgtgagtaacataaaggttgatgtctgtgta
tttccttttgatttgttgcatcttaatggccaagcacttcttgaagaaaacctgaaaatc
cgtagaaagcatctctatgcctcatttgaagaggaatcaggatttctgcagttttcaatg
tcattaatatcaaacgatgctaaggaaatacagaagtttcttgacaaatctgttgatgca
agctgtgagggactaatttttaaaacattagacaaagattctacatatcaaccttccgaa
cggaactggctaaaactgaagaaagattatatgaaaactataggggacacactagatttg
gtaccgatcggcgctttccatggtcaaggaaaacgagcaggagtatacggttcctttctc
ctcgcttgttatgacgtcgatacacaagaatttcaaactatttctaagacaggaactgga
ttcaaagatgaagatcttgaagaaagttccgctaggctccgcactaatctcattccgaaa
ccaaaggcatgctataaacatgcagaaaaagataaacctgatgtctggtttgaagccagt
gaggtgtgggaggtgaaagtttcagacctgaccattagccctgattaccaagctgcagtg
gggaaagtacattcgaataagggaatatctcttcgaatgccacgtcttgttcgattccgg
cctgataaagctcctgaacaggccacgtcatctgagcggattgctgaaatgtataatgct
caaaaacacaatcacccggacaaatccaagaagaaaaattga
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