Medicago truncatula (barrel medic): 25502784
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Entry
25502784 CDS
T01716
Name
(RefSeq) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtr
Medicago truncatula (barrel medic)
Pathway
mtr00040
Pentose and glucuronate interconversions
mtr01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mtr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
25502784
Enzymes [BR:
mtr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
25502784
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GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
Motif
Other DBs
NCBI-GeneID:
25502784
NCBI-ProteinID:
XP_013445796
UniProt:
A0A072TR01
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All DBs
Position
8:complement(27060045..27062550)
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AA seq
455 aa
AA seq
DB search
MARSLDIILFVLCLAILTPTLNANKLENNEYWTEQRPEFDSYWQERAKVAKQENKAAYFK
DPYAISGNFTASISEIIAVKEKGRNLGGLKDDGTCLATNPIDRCWRCDPNWANNRQKLAD
CVQGFGRNTRGGQGGPIYVVTDPSDDDMMNPKPGTLRYAVTRNGSLWITFARSMAITLQQ
ELIMSGDKTIDGRGVDVYISNGAGITIQFVKNVIIHGIKIYDIQVRDGGMIRDSEAHYGF
RTKSDGDGISIFGASNVWIDHVSMRNCTDGLIDAIMGSTAITISNSHFTDHNEVMLFGAS
NDYSEDKIMQITLAFNHFGKRLVQRMPRARFGFVHCVNNDYTHWEMYAIGGSQNPTIISE
GNRFIGPYNKMLGNDLINSKEITKREYTEESEWKTWQWRSINDEYINGAFFVQSGPELKD
RPFSQKDMIKAKPGSFVGRLTRYSGNLRCRVGEPC
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatcacttgacattattctttttgtgctttgtttggcaattctcacccctaca
ttgaatgccaataaattagagaataatgagtattggacagaacaaagacctgagtttgat
tcatattggcaagaaagggctaaggttgcaaaacaagagaataaagctgcttattttaaa
gatccttatgctatctctggaaactttactgcttctatttctgaaatcatagccgtaaag
gagaaaggaaggaacttgggaggacttaaagatgatggaacatgcttggccacaaatcct
attgacagatgctggaggtgtgacccaaattgggctaacaaccgccaaaagctagcagat
tgtgtccaaggattcggaagaaacacccgcggaggtcaaggcggtccaatctatgttgtc
accgatccttctgatgacgatatgatgaacccaaaacccggaaccctccgttacgcggtg
acacgtaacggttccctttggatcacattcgctcgcagcatggccatcacactccaacaa
gagcttattatgtctggtgacaaaaccatcgacggcagaggcgttgatgtttacatttcc
aatggtgccggtatcaccattcaatttgttaagaacgttatcatccatggaattaaaatt
tacgacattcaagtccgagatggtggtatgattagagattctgaggcccattatggtttt
agaacaaagagtgatggtgatggtatttccatctttggtgctagtaatgtttggattgat
catgtttccatgagaaattgtactgatggtttgattgatgctataatgggttccactgct
attaccatctctaacagtcacttcactgaccacaatgaggtgatgctttttggtgctagt
aacgactatagcgaagataaaatcatgcaaatcacattggcattcaaccactttggaaag
agattagtccaaagaatgccaagagcaagatttggttttgttcattgtgttaacaatgac
tacactcattgggaaatgtatgccattggtggtagccagaaccctaccattattagtgag
ggtaacagatttattggcccttataacaaaatgctcggcaacgacctaatcaattcaaaa
gaaataacaaagagggaatacacagaggagagcgaatggaaaacctggcaatggagatca
atcaacgacgaatatattaacggagcattcttcgtacaatctggaccagagctaaaggac
agaccattttcacagaaagacatgattaaagctaaaccaggaagtttcgttggaagactt
acacggtattctggaaacctacgatgccgtgttggtgaaccttgttag
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