Microbacterium testaceum: MTES_0312
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Entry
MTES_0312 CDS
T01423
Name
(GenBank) predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
mts
Microbacterium testaceum
Pathway
mts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTES_0312
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mts03019
]
MTES_0312
Messenger RNA biogenesis [BR:
mts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
MTES_0312
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
RMMBL
Lactamase_B
Lactamase_B_2
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
BAJ73276
UniProt:
E8N9M9
LinkDB
All DBs
Position
complement(312276..313952)
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AA seq
558 aa
AA seq
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MPTTVYDPPELAPGTLRVFPLGGLGEVGRNMTVFEYEGKLLVVDCGVLFPEEHQPGVDLI
LPDFEPIKHRLDDIVGVVLTHGHEDHIGAVPYLLKLKGDIPLIGSGLTLALIEAKLKEHR
IRPYTLTVKEGQREQVGPFDLEFVAVNHSIPDALAVAIRTPAGMVLATGDFKMDQLPLDG
RITDLRAFARLGEEGVDLFLVDSTNADVPGFTPTERGIGPVLDQVIAKAPRRVVVASFSS
HVHRVQQVLDAAHANGRRVALLGRSMVRNMGIAADLGYLNVPDGVLIDYKKARDLPDDKI
VYMSTGSQGEPMAVLSRMANLDHAIEPGEGDTIILASSQIPGNENAIYRVIDGLTKLGAT
VVHKGNAKVHVSGHAAAGELLYCYNILKPKNVLPVHGEYRHLMANAKLAQETGIPEQNTI
LGENGTVVDLRDGVASVVGQLDIGFVYVDGSSVGAITDADLKDRRILGEEGFISVIVVVD
SATGRIVSGPDIHARGVAENDSVFESVKPKIAAALTEAAQSGVRDNHALSQVVRRTIGRW
VNQSLRRRPMIVPLIIEA
NT seq
1677 nt
NT seq
+upstream
nt +downstream
nt
atgcccacgactgtttacgatccgccggagcttgcccccggcaccctccgtgtcttcccc
ctcggcggcctcggcgaggtcggtcggaacatgacggtgttcgagtacgagggcaagctc
ctcgtcgtcgactgcggcgtactgttccccgaggagcaccagcccggcgtcgacctgatc
ctgccggacttcgagcccatcaagcaccgcctcgacgacatcgtcggcgtcgtgctcacg
cacggccacgaggaccacatcggtgcagtgccgtacctcctcaagctcaagggcgacatc
cccctcatcggctcgggtctgacgctcgccctcatcgaggcgaagctcaaggagcaccgc
atccgtccgtacacgctcacggtcaaggaggggcagcgcgaacaggtcggccccttcgac
ctcgagttcgtagcggtgaaccactcgattccggatgccctggccgtggcgatccgcacg
cccgcgggcatggtgctcgccaccggcgacttcaagatggaccagctgccgctcgacgga
cgcatcaccgacctgcgcgccttcgcgcggctcggcgaggaaggcgtcgacctgttcctg
gtggactcgaccaacgcggacgttcccgggttcacgcccacggagcggggcatcgggccg
gtactcgaccaggtgatcgccaaggcaccgcgccgggtcgtcgtcgcgagcttctccagc
cacgtgcaccgcgtgcagcaagtgctcgacgccgcgcacgccaacgggcgtcgcgtggcg
ctgctcgggcgcagcatggtgcgcaacatgggcatcgccgccgatctcggctacctcaac
gtccccgacggcgtgctgatcgactacaagaaggcgcgcgaccttcccgacgacaagatc
gtctacatgtcgaccgggtcgcagggcgagccgatggcggtgctcagccgcatggccaac
ctcgaccacgcgatcgaaccgggtgagggagacacgatcatcctggcatccagtcagatc
ccggggaacgagaacgcgatctaccgcgtgatcgatgggctgacgaagctcggcgcgacc
gtcgtgcacaagggcaatgccaaggtgcacgtctcgggtcacgctgcggcgggcgagctg
ctgtactgctacaacatcctgaagccgaagaacgtgctccccgtgcacggcgagtaccgc
cacctgatggccaacgcgaagttggcgcaggagaccgggatccccgagcagaacacgatc
ctcggcgagaacggcacggtcgtcgatctgcgggacggcgtcgcgtcggtcgtgggacag
ctggacatcggtttcgtctacgtcgacggctcctcggtgggcgccatcacggatgccgac
ctcaaggaccgtcgcatcctgggcgaggagggcttcatctcggtgatcgtcgtcgtcgac
tcggcgacggggaggatcgtctccggtcccgacatccacgcccgcggggtcgccgagaac
gattcggtcttcgagagcgtcaagcccaagatcgccgcggccctcaccgaagcggcgcag
tcaggcgtacgcgacaaccacgccctgtcgcaggtggtgcggcgcacgatcgggcgatgg
gtgaaccaatcgctgcgccggcgccccatgatcgttccgctgatcatcgaggcttga
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