Microbacterium testaceum: MTES_0446
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Entry
MTES_0446 CDS
T01423
Name
(GenBank) uncharacterized conserved protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
mts
Microbacterium testaceum
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mts03016
]
MTES_0446
Enzymes [BR:
mts01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
MTES_0446
Transfer RNA biogenesis [BR:
mts03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
MTES_0446
Prokaryotic type
tRNA splicing ligases
MTES_0446
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RtcB
BEX
Motif
Other DBs
NCBI-ProteinID:
BAJ73410
UniProt:
E8NAY8
LinkDB
All DBs
Position
complement(463955..465124)
Genome browser
AA seq
389 aa
AA seq
DB search
MQKLTERLVSWASLIDDKTIEQARTSSRMPFIHPHLALMPDAHLGLGATVGSVIPTLGAI
MPAAVGVDIGCGMIAVKTQFHASDLDGRDLAELRQQIERAIPLSAGRDNRKIVATAEPRV
AELEALAEKAEFDPGTYAGHWRHQLGSLGSGNHFIEISLDENDDVWMFLHSGSRGVGNRI
AQHHIKVAQRLAKQWWIELPHPDLAYLVEGTPEFTRYIRELRWAQHFALLNREEMMDRVA
NQLGRFLDTPVEERERINCHHNFTESERHFGKQVWVSRKGAIMADAGRPGLIPGSMGTAS
YVVEGLGNPLALNSSPHGAGREYSRSAARKTFTHEQLREAMVGIEYRDTDAFIDEIPQAY
KPIDRVMADAADLVTVRHTLRQIVNVKGD
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagctcaccgaacgactggtgtcgtgggcgagcctgatcgatgacaagaccatc
gagcaggcccgcacctcgtcgcgcatgccgttcatccacccccacctggccctgatgccc
gacgcccacctgggcctcggcgcgacggtcggctcggtcatcccgaccctcggcgcgatc
atgcccgcggctgtcggcgtcgacatcggctgcggcatgatcgccgtcaagacgcagttc
cacgcctccgacctcgatggccgcgacctcgcggagctgcggcagcagatcgagcgcgcc
atcccgctgtcggccggtcgcgacaaccgcaagatcgtcgcgaccgccgaaccgcgtgtc
gccgagttggaggctctggccgagaaggccgagttcgacccggggacgtacgccggtcac
tggaggcaccagctcgggtcgctgggcagcggcaaccacttcatcgagatctcgctcgac
gagaacgacgacgtgtggatgttcctgcactcgggctcccggggtgtcggcaaccgcatc
gcacagcaccacatcaaggtcgcgcagcgcctcgcgaagcagtggtggatcgagcttccg
caccccgacctggcctacctcgtcgaggggactccggagttcacccggtacatccgcgag
ctccggtgggcgcagcacttcgccctgctcaatcgggaggagatgatggaccgcgtcgcc
aaccagctcggccggttcctcgacacccccgtcgaggaacgcgagcggatcaactgccac
cacaacttcaccgagtccgagaggcacttcggcaagcaggtgtgggtgtcgcgcaagggc
gcgatcatggcggatgccggtcgtcccggactcatccccgggtcgatgggcacggcgtcg
tacgtcgtggaggggctcggcaatcccctggcgctcaactcgtcgccgcacggcgcgggc
cgggagtactcccgctccgcggcgcgcaagaccttcacacacgagcagctgcgtgaggcg
atggtgggcatcgagtaccgcgacacggacgcgttcatcgacgagatcccgcaggcgtac
aagccgatcgaccgggtcatggcggatgccgccgacctggtgaccgtgcgtcacacgctg
cggcagatcgtcaacgtgaagggggactga
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