Microbacterium testaceum: MTES_0974
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Entry
MTES_0974 CDS
T01423
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase, beta' subunit/160 kD subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mts
Microbacterium testaceum
Pathway
mts03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
MTES_0974 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mts03021
]
MTES_0974 (rpoC)
03400 DNA repair and recombination proteins [BR:
mts03400
]
MTES_0974 (rpoC)
Enzymes [BR:
mts01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
MTES_0974 (rpoC)
Transcription machinery [BR:
mts03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
MTES_0974 (rpoC)
DNA repair and recombination proteins [BR:
mts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
MTES_0974 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
YlqD
DUF1690
Motif
Other DBs
NCBI-ProteinID:
BAJ73938
UniProt:
E8NF84
LinkDB
All DBs
Position
complement(1016635..1020510)
Genome browser
AA seq
1291 aa
AA seq
DB search
MLESTTFDQIRIGLATADDIRRWSFGEVKKPETINYRTLKPEKDGLFGEQIFGPSRDWEC
ACGKYKRVRFKGIVCERCGVEVTKSSVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDM
APKDLEKVIYFAAYMVISVDEDARHRDLATQENNIRLELKTLGDRRDARIAARLAKLEEE
LAALEAEGAKADQKKKVKDAAEKDMTAARKNADEQIAKLERVWEDFRTLEVGALKPEDDV
FHELQDRFGQYFEAHMGAESIKRRLETFDLQAEADSLHLQISEGKGQRKIRAIKRLKVVN
SFLQTGMSPASMVLDVVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLRRLIDL
GAPEIIVNNEKRMLQEAVDALFDNGRRGRPVTGTGNRALKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIIVGPQLKLHQCGLPKQMALELFKPFVIKRLIDLGHSQNIKAAKRAVERYR
PEVWDVLEEIIRERPVLLNRAPTLHRLGIQAFEPQLVEGKAIQLHPLVCAAFNADFDGDQ
MAVHLPLSVEAQAEARVLMLASNNILKPSDGRPVTLPSQDMIIGLHHLTTLKEGAAGEGR
AFGSVGEAILAKDEGTLDLQAKARIRIPGLTFLEGQAPEGYDKHGLVDASLGQAIFNATL
PKGYPFVREQADKGKLSQIVNKLAEEYPKVEVAASLDRIKDAGFYWATRSGVTVALSDIL
TPPNKAEIVGGYEKQAAKVQAQYEKGLTTDAERRQELIKIWTEATDEVQKAMRDNFPADN
TINRMVSSGARGNWLQIRNIAGMRGLVNNPKGEIIPRPIISSYREGLSVAEYFIATHGAR
KGLADTALRTADSGYLTRRLVDVSQDVIIREEDCGTSKGLELPIAAADSSGALVKDANVE
NSVFARTLATAVVDAQGTVLAEAGDDVGDVLIDKLVEGGIESIKVRSVLTCDSAVGVCAK
CYGRSLATGKIVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGSASADDITQGLPRVQELF
EARTPKGASPIAEADGRITIDETDKAKKVILTPDNGDEPVVYPVLKRATLLVEDGQHVTV
GEPLQVGTLDPKEVMRVQGAREVQKYLVNGVQGVYRSQGVPIHDKHIEVIVRQMLRKVTV
VDHGDTDLLPGELVDFKRYQNINRETVGEGKRPASGRPELMGITKASLATESWLSAASFQ
ETTRVLTQAAMEGKSDPLVGLKENVIIGKLIPAGTGLSKYRNVTVEATEEAKSERYPNRI
FASDGAYSDADLSYVDFDSFTTDDFTPGSYN
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgaatcaaccactttcgatcagatccgtatcggtctggccaccgccgacgacatc
cgtcgttggtccttcggtgaggtcaagaagcccgagacgatcaactaccgcacgctgaag
cccgagaaggacggcctcttcggcgagcagatcttcggaccctcccgcgactgggagtgc
gcctgcggaaagtacaagcgcgtgcgcttcaagggcatcgtctgcgagcgctgcggcgtc
gaggtcaccaagtcctcggtccgccgtgagcgcatgggccacatcgagctcgccgcgccc
gtcacgcacatctggtacttcaagggcgtgccctcgcgcctgggctacctgctcgacatg
gcgccgaaggacctcgagaaggtcatctacttcgccgcctacatggtgatctcggttgac
gaggatgctcgtcaccgcgacctggccacgcaggagaacaacatccgtctcgagctgaag
acgctcggcgaccgccgcgatgcccgcatcgccgcgcgcctggccaagctcgaggaggag
ctcgccgccctggaggcggagggcgccaaggcggaccagaagaagaaggtcaaggacgcc
gccgagaaggacatgacggccgcccgcaagaacgcggacgagcagatcgcgaagctcgag
cgcgtgtgggaggacttccgcacgctcgaggtcggcgccctcaagcccgaggacgacgtc
ttccacgagctccaggaccgcttcggccagtacttcgaggcccacatgggtgccgagtcg
atcaagcgtcgcctcgagaccttcgacctgcaggccgaggccgacagcctccacctgcag
atctccgagggcaagggtcagcgcaagatccgcgcgatcaagcgcctcaaggtcgtcaac
tcgttcctgcagaccggcatgtcgccggcctcgatggtgctcgacgtcgttccggtgatc
ccgccggagctgcgcccgatggtccagctcgacggtggccgcttcgcgacctccgacctg
aacgacctctaccgtcgcgtgatcaaccgcaacaaccgcctccgtcgcctgatcgacctc
ggtgcccccgagatcatcgtcaacaacgagaagcgcatgctgcaggaggccgtcgacgca
ctgttcgacaacggtcgccgtggtcgccccgtcaccggtaccggcaaccgcgccctgaag
tccctgagcgacatgctcaagggtaagcagggtcgtttccgccagaacctgctcggaaag
cgcgtcgactactcgggtcgttcggtcatcatcgtcggaccccagctgaagctgcaccag
tgcggtctgcccaagcagatggccctcgagctcttcaagccgttcgtcatcaagcgcctg
atcgacctcggtcactcgcagaacatcaaggccgccaagcgcgccgtcgagcgctaccgt
cccgaggtctgggacgtgctcgaagagatcatccgcgagcgccccgtgctgctgaaccgt
gcacccaccctgcaccgtctcggcatccaggcgttcgagccccagctcgtcgagggcaag
gcgatccagctgcacccgctcgtctgcgcggcgttcaacgccgacttcgacggtgaccag
atggccgtccacctgcccctgtcggtcgaggctcaggccgaggcccgcgtgctgatgctc
gcctcgaacaacatcctgaagccgtcggacggccgcccggtcaccctgccctcgcaggac
atgatcatcggtctgcaccacctcaccaccctcaaggagggtgcggcgggcgagggtcgt
gcgttcggttccgtgggcgaggcgatcctggccaaggacgagggcaccctcgacctgcag
gccaaggcgcgcatccgcatccccggcctgacgttcctcgagggccaggcgcccgagggc
tacgacaagcacggcctcgtcgacgcctcgctcggtcaggcgatcttcaacgcgacgctc
cccaagggctacccgttcgtccgcgagcaggccgacaagggcaagctctcgcagatcgtc
aacaagctggcggaggagtaccccaaggtcgaggtcgcggcatcgctcgaccggatcaag
gacgccggcttctactgggccacccgttcgggtgtcacggtggcgctgagcgacatcctc
accccgccgaacaaggcggagatcgtgggcggctacgagaagcaggccgcgaaggtccag
gcgcagtacgagaagggtctcaccaccgacgccgagcgtcgtcaggagctcatcaagatc
tggaccgaggccaccgacgaggtccagaaggcgatgcgggacaacttccccgccgacaac
accatcaaccgcatggtctcgtcgggcgcccgtggtaactggctgcagatccgcaacatc
gcgggtatgcgaggcctggtgaacaaccccaagggtgagatcatcccgcgtccgatcatc
tcctcgtaccgcgagggtctgtcggtcgccgagtacttcatcgcgacccacggtgcccgt
aagggtctggccgacacggccctccgtacggccgactcgggttacctgacgcgtcgtctg
gtggacgtctcgcaggacgtcatcatccgcgaagaggactgcggcacgtcgaagggcctc
gagctcccgatcgccgcagccgactcgagcggcgcgctggtcaaggacgcgaacgtcgag
aactcggtgttcgcccgcacgctggcgaccgctgtcgtcgacgcgcagggcaccgttctc
gccgaggccggcgacgacgtgggcgacgtgctcatcgacaagctggtcgaggggggcatc
gagtcgatcaaggtccgctccgtgcttacctgcgactcggccgtcggtgtctgcgcgaag
tgctacggccgttcgctcgccaccggaaagatcgtcgacatcggcgaggccgtcggcatc
atcgcggcccagtcgatcggtgagcccggtacccagctgacgatgcgtaccttccacacc
ggtgggtccgcgtcggccgatgacatcacgcagggtctgccccgcgtgcaggagctcttc
gaggcccgtacccccaagggtgcgtcgccgatcgccgaggcggatggtcgcatcacgatc
gacgagaccgacaaggccaagaaggtcatcctcacgcccgacaacggcgacgagcccgtg
gtctaccccgtcctgaagcgcgcgacgctcctggtcgaggacggccagcacgtcacggtc
ggcgagccgctgcaggtcggaacgctcgaccccaaggaggtcatgcgcgtgcagggtgcc
cgcgaggtgcagaagtacctcgtgaacggcgtccagggcgtgtaccgctcgcagggtgtg
ccgatccacgacaagcacatcgaggtcatcgtgcgccagatgctgcgcaaggtcaccgtc
gtcgaccacggcgacaccgacctgctcccgggtgagctcgtcgacttcaagcggtaccag
aacatcaaccgcgagacggtcggcgagggcaagcgtcccgcgtccggtcgtcccgagctg
atgggtatcacgaaggcgtcgctcgcgacggagtcgtggctgtccgccgcgtcgttccag
gagaccacccgcgtcctgacgcaggcggccatggagggcaagagcgacccgctcgtcggc
ctcaaggagaacgtcatcatcggaaagctcatccccgcggggacgggcctgtcgaagtac
cgcaacgtcaccgtcgaggcgacggaagaggcaaagagcgagcgataccccaaccgcatc
ttcgcctccgacggtgcgtactccgacgccgacctgagctacgtcgatttcgacagcttc
acgacggacgacttcacgcccggtagctacaactaa
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