Microbacterium testaceum: MTES_1170
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Entry
MTES_1170 CDS
T01423
Name
(GenBank) topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mts
Microbacterium testaceum
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mts03032
]
MTES_1170
03400 DNA repair and recombination proteins [BR:
mts03400
]
MTES_1170
Enzymes [BR:
mts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MTES_1170
DNA replication proteins [BR:
mts03032
]
Prokaryotic type
DNA Topoisomerases
MTES_1170
DNA repair and recombination proteins [BR:
mts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MTES_1170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
BAJ74134
UniProt:
E8N6I6
LinkDB
All DBs
Position
complement(1246718..1247683)
Genome browser
AA seq
321 aa
AA seq
DB search
MARLIRVRPYEDPGYRRVRSGSGYRFVDHTGAPVPEREAERARGLVIPPAWREVWIAREP
NAHIQAVGTDEAGRRQYTYHADWSKRQDKGKFARALQLAEALPRARARVTQSLRRSEIDR
ERVLAVSFRLLDLVAPRVGNARYFVTNGSRGLTTLQRRDATIEGDLIRLSFPAKSGKRAD
LRVHDAELASLIEELALGRSRAALLSYKRGRRRVPLTPGDVNAYVRSLTGGPFSAKDFRT
LRGTIMAAESLAKVGAVGGKNERKKAEVAAVRATAEALGNTPAVAKSSYIDPRVFSLYRK
GRTMELGGSKDAAIRRLILGE
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atggcgcgtctcatccgcgtccgtccctacgaggacccgggctatcgccgcgtccgctcg
ggatcgggctaccggttcgtggaccacacgggggcgcccgttcccgagcgggaggccgag
cgggcgcgcggtctcgtcatcccgcccgcctggcgggaggtgtggatcgcccgcgagccg
aacgcccacatccaggcggtggggaccgacgaggccggccgccggcagtacacgtaccac
gccgactggtcgaagcggcaggacaagggcaagttcgctcgggcgctgcaactcgccgag
gcgctgccccgcgctcgagcccgcgtgacgcagtcgttgcgccgcagcgagatcgaccgg
gagcgggtgctggcggtgtcgttccgcctgctcgacctcgtcgcgccgcgtgtgggcaac
gcgcggtacttcgtcacgaacggcagccggggcctcacgaccctccagcggagggatgcc
acgatcgagggcgatctcatccgcctctcgtttccggccaagagcggcaagcgcgccgat
ctgcgcgtgcacgatgccgaattggcatccctcatcgaagaactcgcgctcggacgctcg
cgggcggcgctcctcagctacaagcgcgggaggcggcgcgtgccgctgacgccgggcgac
gtcaacgcctacgtccgctccctgaccggcggccctttcagtgcgaaggacttccgcacg
ctccgcggcacgatcatggcggcggagtctctcgcgaaggtgggagccgtcgggggcaag
aacgaacgcaagaaggccgaggtggcggcggtgcgcgcgaccgcggaagcgctcggcaac
acccccgccgtggcgaagtcgagctacatcgatccccgcgtcttctcgctgtaccgaaag
ggtcgcacgatggagctgggcggctcgaaggatgccgcaatcaggcgtttgatcctcggg
gagtga
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integrated database retrieval system
