Microbacterium testaceum: MTES_2900
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Entry
MTES_2900 CDS
T01423
Name
(GenBank) superfamily II DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mts
Microbacterium testaceum
Pathway
mts03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MTES_2900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mts03019
]
MTES_2900
03400 DNA repair and recombination proteins [BR:
mts03400
]
MTES_2900
Enzymes [BR:
mts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTES_2900
Messenger RNA biogenesis [BR:
mts03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MTES_2900
DNA repair and recombination proteins [BR:
mts03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MTES_2900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
TrmB
HEM4
PcrA_UvrD_tudor
Dimerisation
Cas3-like_C_2
HTH_IclR
DUF3553
Motif
Other DBs
NCBI-ProteinID:
BAJ75864
UniProt:
E8NA34
LinkDB
All DBs
Position
complement(3143524..3145170)
Genome browser
AA seq
548 aa
AA seq
DB search
MNAPATLEQSARTAREVFGWDDLLPGQAEAIDAVVSGRDTLVVFPTGAGKSAVYQIAGCE
LGGTTVVISPLLALQRDQIDSIDAAPDAPAAVALNSRTSASARQAAWAAIEGDDAVYAFL
APEQLANPEVFDRLAHADVRLVVVDEAHCVSAWGHDFRPDYARIGDAVEALGHPPVLALT
ATASAPVRDDIVASLGMRDPHLEVRGMDRPEIHMAVRRHEHDVDKRRAVLADVQDADGPA
LLYVATRKATELYADELRDLGLRAAAYHGAMAQKRRDEVHSAWSAGELDVVVATSAFGMG
VDKSDVRLVVHADVTESLDAYAQEIGRAARDGQPARAILHYRAEDFSLRSFFAGGHTKRA
DIAGVWDELRRAKKPLRAKDVAEKSGRPARAIGRVLNQLVACGLAVSGAEGVSVQKKVSA
GDAVSAVRERDEAEERIRASRIEIMRGYAETTHCRRRALLEYFGVESPASCGSCDRCDAG
AVAPVAAEEAVDDGGIRIDSLVAHAEFGPGTVMGIEDDRLTVFFPEHGYKVLARAAFENG
ILELGEAA
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgcacccgccaccctcgaacagtccgcccgtaccgcccgcgaggtgttcggctgg
gacgacctgctgcccggccaggccgaggcgatcgacgcggtcgtgagcgggcgtgacacg
ctcgtggtgttcccgacgggcgcgggcaagtcggcggtgtaccagatcgcgggatgcgag
ctgggcggaacgacggtggtgatctcgccgctgctggcgctgcagcgcgaccagatcgac
tcgatcgacgccgctcccgacgcgcccgccgcggtcgccctcaactcccggacgagcgcc
tcggcacgtcaggctgcgtgggcggctatcgagggcgacgacgccgtctacgcgttcctc
gcccccgagcagctcgccaaccccgaggtcttcgaccgcctcgcgcacgccgacgtgcgg
ctcgtcgtcgtcgacgaggcgcactgcgtgtcggcctggggccacgacttccgccccgac
tatgcccgcatcggcgacgccgtcgaggccctcgggcatccgcccgtcctggcgctcacg
gccacggcatccgctcccgtgcgcgacgacatcgtcgcgagcctcggtatgcgcgatccg
cacctcgaggtgcgcggcatggatcgccccgagatccacatggccgtccgccgccacgag
cacgacgtcgacaagcgccgcgccgtcctcgccgatgttcaggatgccgacggccccgcg
ttgctgtacgtcgccacgcgcaaagccaccgagctgtacgccgacgagctgcgggacctc
ggtctccgggccgccgcgtaccacggtgcgatggcacagaagcggcgcgacgaggtccac
tccgcgtggagcgcgggagagctcgacgtggtcgtggcgacctcggccttcggcatgggg
gtcgacaagagcgacgtgcgcctggtggtgcacgccgatgtcaccgagtcgctggacgcc
tacgcgcaggagatcggccgcgcggcgcgcgacggacagccggcccgggcgatcctgcac
taccgggccgaggacttctcgctgcgatcgttcttcgccggcggccacacgaagcgcgcc
gacatcgcgggcgtctgggacgaactgcgacgggcgaagaagccgctccgcgcgaaggac
gtcgccgagaagagcggtcggccggcccgagccatcgggcgcgtgctcaaccagctcgtc
gcgtgcggtctcgctgtgtcgggcgccgagggcgtctcggtgcagaagaaggtctccgcc
ggcgacgccgtctccgccgtgcgcgagcgagacgaggccgaggagcggatccgcgcctcg
cgcatcgagatcatgcgcgggtacgccgagaccacccactgccgtcgacgcgcgctgctg
gagtacttcggcgtcgagagcccggcatcctgcgggtcctgcgatcgatgcgacgccggg
gcggtcgcgccggtcgcagccgaggaagcggtcgacgacggcgggatccgcatcgactcg
ctcgtcgcgcatgcggagttcggaccgggcacggtcatggggatcgaagacgaccgactc
acggtcttcttccccgagcacggctacaaggtcctcgcacgcgcggcgttcgagaacggc
atcctggagctcggcgaagcggcgtag
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