Microbacterium testaceum: MTES_3120
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Entry
MTES_3120 CDS
T01423
Name
(GenBank) superfamily I DNA and RNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mts
Microbacterium testaceum
Pathway
mts03420
Nucleotide excision repair
mts03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MTES_3120
03430 Mismatch repair
MTES_3120
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mts03400
]
MTES_3120
Enzymes [BR:
mts01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MTES_3120
DNA repair and recombination proteins [BR:
mts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MTES_3120
MMR (mismatch excision repair)
Other MMR factors
MTES_3120
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
DUF6416
Motif
Other DBs
NCBI-ProteinID:
BAJ76084
UniProt:
E8NC41
LinkDB
All DBs
Position
3384970..3388257
Genome browser
AA seq
1095 aa
AA seq
DB search
MTSTLSAATIAAALGQFPPTPEQTAVIESPLAPALVVAGAGSGKTETMAGRVVWLVANGI
VRRDEVLGLTFTRKAAGELAERIQRRLQRLSEFETRGLLPLLPELHASGRLGVFAELAAQ
QGARGDAARRAVLDALADEYATLGTGESDGDQLLHRPTVSTYNSFADSLVREHGLRIGRD
AESAILSESAAWLLMRRVVFASDDPRLEERQESPRTLIDAALRIARDGVDNLVDLERLAA
FPDEFGRIVERPSTSARVTVYKDVADAAARVSALSLLATLAAAYDREKIRLGVMDFADQV
AGALRIVREHPAVVAELRARYRVVLLDEYQDTSVVQTDLLSTLFGGTGVMAVGDPHQAIY
AWRGASAGNLGGFPAAFSPEGGCRHFSLLTSWRNSARVLDVANAVLAPLADRSPIAVGAL
TSRPGAPDGLVEIVFERDLDTEADRVASWFAGIRAARQAEGRATTGAVLFRSKKHMVRFG
DALGRRGIPHRILGLGGLLTTPEVVDVVSALRVISDPEAGSALIRLLSGPRWAVGLADLR
ALAQLARRLATHDVALQPLEAEVVDRLRATPGADRASLVDALDFLARQNDDHGWLADITP
AGRARLREAGTVFAGLRRSIGAPIPELIRLIEAELRLDIELAANESRGPARIASAQLRAF
VDEIRGFLAADESGSVASLLAWLDHAEQADEFAPRTEPPEDDVVQLLTIHGSKGLEWDAV
AVVRLVTDELPSLPRDTKGWLGFGILPSDFRGDAAWLPTLGWRGAETQQELKAAIDDFVV
ANRARQLDEDRRLAYVAFTRARDHLLLSGSTWSGTKKPRRPSVFLDEAAEALGSELVVGE
AGEDPYDGERRLLHWPLDPLGSRRTAVTAAAAEVVAARDAAPAEPDPDLALLLAERAARL
QPVHAPAPTRIPASRFKDYVADYGAAVDEVRRPMPERPYRQTRLGTLFHAWVEQRSGLVG
AGVGLDDGGLWEDDDFGASAADAAELQRLRDCFERSEWAALQPIEVETEIDFVTRRLDGR
EHVVICKLDAVYRRGDRYEIVDWKTGKPPATAEERRSRMVQLELYREAYHAKHGVPLESI
DVALFYVGDELVIRG
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgacgctctccgcggcgacgatcgccgccgcgctcggccagttcccgcccacg
cccgagcagaccgccgtgatcgaatcgccgctcgcccccgccctcgtcgtggccggcgcc
ggcagcggcaagaccgagacgatggcgggccgtgtcgtgtggctcgtcgcgaacgggatc
gtgcgccgcgacgaggtgctcggcctgaccttcacccgtaaagccgcgggggagctggcc
gaacgtatccaacggcgccttcagcggctctcagagttcgagacgcgcggcctgctgccg
ctccttcccgagctgcacgcctcaggcaggctcggcgtcttcgccgaactcgcggcgcaa
cagggagcgcgcggtgatgcagcgcgccgcgcggtgctcgacgctctcgccgacgagtac
gcgacgctcggcacgggggagagcgacggcgaccagctcctgcaccggccgaccgtctcg
acgtacaacagcttcgccgattcgctcgtgcgggagcacgggctgcgcatcgggcgcgac
gccgagtcggcgatcctctcggagtccgcggcgtggcttctcatgcggcgcgtggtcttc
gcctcggacgacccgcggctcgaggaacggcaggagtctccgcgcaccctgatcgacgcg
gcgctgcggattgcgcgcgacggtgtcgacaacctcgtcgacctcgaacgcctcgcggcc
ttccccgacgagttcggacggatcgtcgagcgcccatcgacatccgcgcgggtcacggtg
tacaaggacgtggcggacgccgccgcgcgtgtctccgcgctcagtctgttggcgaccctc
gccgcggcctacgaccgcgagaagatccggctcggcgtcatggacttcgccgatcaggtg
gccggggcgctgcggatcgtccgcgagcatcccgccgtggtggccgagctgcgcgcgcga
tatcgcgtcgtgctgctcgatgagtatcaggacacgtccgtcgtccagaccgacctgctg
tcgaccctgttcggaggcacgggcgtgatggccgtgggcgatccccaccaggccatctac
gcgtggcgcggtgcgagcgcgggcaacctcggcgggttcccggcggccttctcaccggag
ggcggatgccgacacttctcgctcctgaccagctggcgcaacagtgcccgggtcctcgac
gtggccaacgccgtcctcgcgccgctcgccgaccgttcgccgatcgccgtgggggcgctc
acctcgcgtcccggtgcgcccgatggcctggtcgagatcgtgttcgagcgcgacctcgac
accgaggccgaccgcgtcgcttcgtggttcgccggtatccgcgcagcccgtcaggccgag
gggcgcgcgacaacgggtgccgtcctcttccgcagcaagaagcacatggtgcgtttcggg
gacgcgctggggcggcgtggcatccctcaccgcattctggggctgggtggcctgctcacg
acacccgaggtcgtggacgtcgtgtccgcgctgcgggtgatcagcgacccggaggccggg
tccgcgctcatccggctgctgtcgggaccgcggtgggcggtcgggcttgccgacctgcgc
gcactcgcccagctcgcgcgacgtctcgcgacccacgacgtcgctctgcaaccgctcgag
gccgaggtcgtcgatcggctgcgcgccacgccgggcgccgatcgcgcgtcgctcgtcgac
gccctcgatttcctcgcgcggcagaacgacgaccatgggtggctcgccgacatcacaccc
gccgggcgagcccgtctgcgggaggccgggaccgtgttcgcgggccttcgccgcagcatc
ggcgcgcccatccccgagctcatccgcctgatcgaagccgagctgcgtctcgacatcgag
ctcgcggccaacgagtcgcggggtcctgcccggattgcctccgcgcagctccgagcgttc
gtcgatgagatccgcggattcctcgccgcagacgagtcgggctcggtcgcgagtctgctg
gcgtggctggatcacgcggaacaagcggacgagttcgcgccgcggaccgagccgcccgag
gacgacgtcgtccagctcctgacgatccacgggtcgaaggggctcgaatgggatgccgtg
gcggtcgtgcggttggtgacggatgaactcccgtccctcccgcgtgacacgaaggggtgg
ctggggttcggcatcctgccctccgacttccgcggtgacgcggcctggcttccgacgctc
ggttggcggggggccgagacgcagcaggagctgaaggccgccatcgacgacttcgtcgtg
gcgaaccgcgcgcgtcagctcgacgaggaccgtcgactggcgtacgtcgctttcacccgc
gcccgtgaccacctgctgctctcggggtccacctggtcgggcacgaagaagccccgtcgg
cccagcgtgttcctcgatgaggcggccgaggcgctgggcagcgagctcgtcgtcggagag
gcgggggaggatccctacgacggggagcgccgtctgctgcactggccgctcgaccccctc
ggttcccgccggacggccgtgaccgccgcggcggcggaggtcgtcgcggcgcgggacgca
gctccggcggagcccgaccccgatctggcgttgctgctcgccgagcgcgccgcgcgcctg
cagccggtccatgcccccgcgcccacgcgcattcccgcctctcgattcaaggactacgtc
gccgattacggggcggccgtcgatgaggtgcggcgtccgatgccggagcggccgtatcgg
cagacgcggctgggaaccttgttccatgcgtgggtcgagcagcgttcggggctcgtcggc
gcgggagtgggcctcgatgacggcggtctgtgggaggacgacgacttcggcgcctccgcc
gcggacgcggccgagctccagcgactccgtgactgtttcgagcgctccgagtgggcggcg
ctgcagccgatcgaggtggagaccgagatcgacttcgtcacgcgacggctcgacgggcgc
gagcacgtcgtgatctgcaagctcgatgccgtctaccgccggggcgatcgctacgagatc
gtcgactggaagaccggcaaacctccggccaccgctgaagagcggcgctcgcggatggtg
cagctcgagctgtaccgcgaggcgtaccacgccaagcacggagtgccgctggagtccatc
gacgtggcgctgttctatgtcggggacgagctggtcatccggggatga
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