Microbacterium testaceum: MTES_3245
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Entry
MTES_3245 CDS
T01423
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mts
Microbacterium testaceum
Pathway
mts03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mts00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MTES_3245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mts03400
]
MTES_3245
Enzymes [BR:
mts01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MTES_3245
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MTES_3245
DNA repair and recombination proteins [BR:
mts03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MTES_3245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
Cas12f1-like_TNB
Zn_ribbon_6
DZR
Motif
Other DBs
NCBI-ProteinID:
BAJ76209
UniProt:
E8NDE3
LinkDB
All DBs
Position
3514513..3515403
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVEVVRAGLEPAVTGALITSVDVRDERALTRHTGGAAHFEAELTGRRIDAAVRRG
KFLWMPVSADEAIVTHLGMSGQMLLRVPGAPEERHERIRIELEHPVHGPLSVVFADQRTF
GSLAVDRLVDTPDGAAAGRGSSLPRVPTQVAHIARDPLDPAFDVSRFRSRVGRTASGIKR
VLLDQTVASGIGNIYADESLWAARIHPEAVASSLPTRAVNRLLGEVREVLDKALAEGGTS
FDAQYVNVNGQAGYFAHSLNAYGRTGQPCPRCGRPIVRVSFMNRSSHFCPHCQRLR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgagcttcccgaggtcgaggtcgtccgcgcgggcctcgaacccgcggtgaccggc
gcgctgatcacctcggtggacgtccgcgacgagcgcgccctcacacgtcataccggggga
gcagcccacttcgaggccgaactgaccggtcggcggatcgatgccgctgttcgtcgcgga
aagttcctctggatgccggtctccgccgacgaagcgatcgtgacgcatctcgggatgagc
gggcagatgctcctccgcgttccgggagcgccggaggagcgccacgagcgcatccgcatc
gagctcgagcatccggtacacggcccgctctcggtggtcttcgccgaccagcggaccttc
ggttccctcgcggtcgaccgactcgtcgacacccctgacggcgccgcggccggacgcgga
tcgagcctgccgcgcgttccgacccaggtcgcgcacatcgcccgcgatccgctcgacccc
gccttcgacgtctcgcgcttccggtcacgcgtcggtcgaacagcgtccggcatcaagcgc
gtcctgctcgatcagaccgtggcgagcggcatcggcaacatctacgccgatgagtcgctg
tgggcggcgcgcattcaccccgaggccgtggcatcctctctgccgacccgcgcggtgaat
cgtctgctgggcgaggtccgggaggtgctcgacaaggcgctggccgagggcgggaccagc
ttcgacgcgcagtacgtgaacgtcaacggccaggccgggtacttcgcgcactcgctcaac
gcctacgggcggaccggccagccgtgccctcgctgcggccggccgatcgtccgggtgtcg
ttcatgaaccgatcgagccacttctgcccgcactgtcagcgcctccgctga
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