Marivirga tractuosa: Ftrac_0002
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Entry
Ftrac_0002 CDS
T01365
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03030
DNA replication
mtt03430
Mismatch repair
mtt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Ftrac_0002
03430 Mismatch repair
Ftrac_0002
03440 Homologous recombination
Ftrac_0002
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mtt03032
]
Ftrac_0002
03400 DNA repair and recombination proteins [BR:
mtt03400
]
Ftrac_0002
Enzymes [BR:
mtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Ftrac_0002
DNA replication proteins [BR:
mtt03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Ftrac_0002
DNA repair and recombination proteins [BR:
mtt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Ftrac_0002
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
Rv2179c-like
GIY_YIG_2
DUF7508
RNase_H_2
UPF0236
Motif
Other DBs
NCBI-ProteinID:
ADR20019
UniProt:
E4TUP1
LinkDB
All DBs
Position
complement(1947..3344)
Genome browser
AA seq
465 aa
AA seq
DB search
MYAIVDIETTGGYAARNRICEIAIILHDGEKVVKEYQTLINPERHIPPQLSAIHGINDQM
VEDAPKFYEEAKTIHELLEGNIFVAHSVNFDYSFVKAAFQDLGYELKLKKLCTVRLSRKI
FPGLKSYSLGNICENRGIKINDRHRAFGDAIATAELFTQLVQHDTDNHIQKSLKKNAAVV
NIPENLERTVFEDLPESPGVYYFLNQKSQIIYVGKAKNIKKRVSNHFGGSKLEVAKQAFQ
SQIHHVDYYLTGNELIALLHESHEIRKNWPRYNRAQKNNSPGYSIYLYEDRQGYKRLQLG
RKQTGMQSLMRFPNHASGFSFLNEVSKKLKICPKFAGIQSSPGTCFDYSVNLCEGACAGE
ESVSQHNEKIQAFIDHCKAEKSDYLLIGEGRNINETAFVLVEDGFYKGFGFYTQEDSIEH
WEEFSNYLIQYPDHPEIYKILSSEHATRHYKKIKKEGFLKRTESA
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccatagttgatattgaaaccactggaggttatgcagcccgaaacagaatatgc
gaaatcgccattattttgcatgatggcgaaaaagtggtcaaagaatatcagactttaatc
aatcctgaaagacacattcctccacaactctctgctattcatggtataaacgaccaaatg
gtggaagatgctcctaaattttatgaggaagctaaaaccattcatgagctactagaaggg
aatatctttgtagcgcatagtgtaaattttgactactcctttgttaaagcagcatttcaa
gatttgggatatgagttaaaattgaaaaaactctgtacggtccgcttgagcagaaaaata
tttccaggattaaagagctatagtctaggaaacatttgtgaaaatcggggaatcaaaata
aatgaccgacacagagcattcggggatgccatcgccacagctgagcttttcacccaatta
gttcagcacgacacagataatcacatccaaaaatcattgaaaaagaatgccgctgtagta
aatattcccgaaaatctagaaagaacggtttttgaagacttacctgaatcgccaggcgtt
tattattttcttaatcagaaaagccaaatcatttacgtaggcaaagccaaaaacattaaa
aagagggtaagcaatcattttggcggaagtaagttggaagtagccaaacaagctttccaa
agccaaattcatcatgtagattattatttgactggcaatgaactgattgcactcttacat
gaatcacatgaaatcagaaagaattggccccgctataaccgagcccagaagaataacagt
cctggttattccatttacctttacgaagacagacaaggctacaaaagattgcaactaggc
agaaaacaaactggaatgcaaagtttgatgcgctttcctaatcacgcttctggatttagt
tttttaaatgaagtcagtaaaaaattgaaaatctgtccaaaatttgctggaattcaatct
agtcccgggacttgctttgattatagcgtaaatctttgtgaaggagcctgcgctggagaa
gaatctgtatctcaacacaatgaaaagattcaagcttttatagatcactgcaaagccgaa
aaaagtgattatctattaattggagaaggtcgaaacatcaatgaaacagcttttgtatta
gtagaagatggtttttacaaaggctttggtttttatactcaggaagattcaatagagcac
tgggaagaattcagcaattacttaattcagtatcctgaccatcctgaaatttataaaata
ctgagcagtgaacatgctactaggcattataagaaaattaagaaggaaggatttttgaag
aggacggaatctgcttga
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