Marivirga tractuosa: Ftrac_0215
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Entry
Ftrac_0215 CDS
T01365
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ftrac_0215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtt03019
]
Ftrac_0215
03016 Transfer RNA biogenesis [BR:
mtt03016
]
Ftrac_0215
Enzymes [BR:
mtt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
Ftrac_0215
Messenger RNA biogenesis [BR:
mtt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
Ftrac_0215
Transfer RNA biogenesis [BR:
mtt03016
]
Prokaryotic type
tRNA degradation factors
Ftrac_0215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
S1_RRP5
PNPase
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
ADR20226
UniProt:
E4TL88
LinkDB
All DBs
Position
283435..285576
Genome browser
AA seq
713 aa
AA seq
DB search
MAIPNAIKKTFNLPDGREISIETGKLAKQADGSVEVRMGDTILLATVVSNKEAREGVDFL
PMSVDYQEKFASSGKIPGGFLKREGKLSDYEVLTSRLVDRALRPLFPSDYHAETQVMIQL
FSLEENDLPDALAALAASAALTASDIPFAGPISEVRVGRVNGEMIINPNSKQLEESDIDM
IVAATIDNIMMVEGELKEISEQEMVEAINFAHESIKLQCQAQLDLAKDAGKTEKREYNHE
EEPDAELEKEIFDKYYQQFFDIAAKGLADKAERARLFSEIKDGYIDSLPEDTEISLSLAK
SYLSAAQKKAVRNATLETRSRLDGRKLDEIRPIWSEIDYLPSAHGSAVFTRGETQSLTTV
TLGTKLDEQMVDGAVHSGYNKFILHYNFPAFSTGEARPNRGPGRREVGHGNLALRALKQI
LPTPDELPYTIRVVSDILESNGSSSMATVCAGSLALMDAGIPIKAPVSGIAMGLISDPET
GKYAILSDILGDEDHIGDMDFKVTGTEKGITACQMDIKVDGLSSELMMEALNQAKAGRDH
IRNEMSKTIAAPREDYKPNAPRVVNIEIDREMIGAVIGPGGKVVQEIQKTTGATVVIEET
EKGGKINVFAVNKESLDQAVKWIKGIVAKPEVGEVYDGIVKAIQPYGAFVEIMPGKDGLL
HISEIKHEKIDNLEGILEIGEEVKVKLIDIDKKTGKLRLSRKVLLPKPEKEEK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atggctataccaaatgcaatcaaaaaaactttcaacctacctgatggaagagaaattagc
atagaaacaggaaaattagcaaaacaagcagacggatcagtagaagtaagaatgggggat
accattttgcttgctacagttgtttctaacaaagaagctagagaaggagttgatttcctt
ccaatgtcggtagattaccaagaaaaatttgcttcatcaggaaaaatacctggtggattt
ttgaaaagagaagggaaactttctgattatgaggtattaacttcccgattagtggataga
gctttacgtcctctattcccatctgattatcatgctgaaacgcaagtgatgattcagtta
ttttcattagaagaaaatgatttaccagatgccttagctgctttagcagcatctgcagca
cttactgcatcggatatcccttttgctgggcctatttctgaagttagagtgggacgtgta
aatggtgaaatgatcattaacccaaattcaaagcagctagaagaatctgatattgatatg
attgtggcggccaccatcgataatatcatgatggttgaaggtgaattaaaagaaatttct
gagcaggaaatggttgaagcgattaatttcgctcacgaatcaattaagttacaatgccaa
gcgcagttagatttagcaaaagatgctggcaaaactgaaaagcgtgagtataatcacgaa
gaagaaccagatgccgaattggaaaaagaaatttttgataagtactatcagcagttcttt
gatattgcagctaaaggattagcagataaagctgaaagagcacgtttattttcagaaatt
aaagatggctacatcgattctttgccagaagatactgaaattagcctatcattagccaaa
agttatttaagtgctgctcagaaaaaagcagttcgaaatgctactttggaaacgcgtagc
agacttgatggtcgaaaacttgatgagatcagaccaatttggagtgagatcgattattta
ccatcagcacatggttctgcggtctttacaagaggggaaacgcaatccttgactactgtt
accttgggtactaaacttgatgagcagatggtagatggtgcagttcactctggatacaac
aaatttattttacattataacttccctgctttctcaactggagaagcaagacccaataga
ggtccaggaagaagagaagttggacatggtaatttggctttaagagctttaaagcagatt
ttacctactcctgatgaattaccatatactatccgtgtagtatctgatatcttagagtca
aatggttcgtcttccatggctaccgtttgtgcaggttcattagctttaatggatgctggt
attccaattaaagccccagtttcaggtattgcaatgggattaatctcagatccagagact
ggtaaatatgctattctttctgatatcttaggagatgaagatcatattggtgatatggac
ttcaaagttacgggtactgaaaaaggtatcacagcttgtcaaatggatattaaagttgat
ggtctttcttctgaattgatgatggaagcattgaatcaagctaaggctggtcgtgaccat
atcagaaatgagatgtcgaaaaccattgctgctcctagagaagattataaaccaaatgct
cctagagttgttaatatcgaaattgatagagaaatgatcggtgcggtaatcggccctggt
ggtaaagtagttcaggagattcaaaaaactactggtgctactgtcgtgattgaagaaact
gaaaaaggcggtaaaatcaatgtttttgctgtaaataaagaatctttggatcaagcagta
aaatggatcaaaggaattgtagctaagccagaggttggtgaagtttatgacggaatcgtt
aaagctatacagccttacggtgcatttgttgaaattatgcctggtaaggatggtctatta
catatctctgaaatcaaacatgagaaaatcgataacttggaaggtattttagagatagga
gaagaggttaaagtgaagttgatcgatattgataaaaagactggaaagttaagattatca
aggaaggtattattgcctaaacctgaaaaagaagagaaataa
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