Marivirga tractuosa: Ftrac_0837
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Entry
Ftrac_0837 CDS
T01365
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03420
Nucleotide excision repair
mtt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Ftrac_0837
03430 Mismatch repair
Ftrac_0837
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtt03400
]
Ftrac_0837
Enzymes [BR:
mtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Ftrac_0837
DNA repair and recombination proteins [BR:
mtt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Ftrac_0837
MMR (mismatch excision repair)
Other MMR factors
Ftrac_0837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
PcrA_UvrD_tudor
DUF3553
ResIII
AAA_11
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ADR20839
UniProt:
E4TSL9
LinkDB
All DBs
Position
complement(1039088..1041352)
Genome browser
AA seq
754 aa
AA seq
DB search
MDYLSHLNPPQREGVENLEGPTMIIAGAGSGKTRVLTYRIAHLITVKNVDPFSILALTFT
NKAAKEMRERIEKIVGTDARNLWMGTFHSVFARILRAEADKLGYPSNFTIYDTEDSKSLI
RAIVREMGLDDKVYKQNVVYSRISGAKNNLVSWQNYMNNSVYVSEDEQAQKPKMGAIYKE
YVQRCFRSGAMDFDDLLFNTNVLFRDHLDVLNKYQQRFKYVMIDEFQDTNISQYLITKRL
SAVNQNICIVGDDAQSIYAFRGANIQNILNFEKDYPDLRVIKLEQNYRSTQNIVNAANSV
ILKNAAQLKKKVWTQNDDGELVHLIKSTSDNEEGRLVASSIFEDKNNKKLENKDFAILYR
TNSQSRAMEEALRKSNIPYRIYGGLSFYQRKEIKDLLAYLRFTINHNDEQSFRRIINLPK
RGIGASSVDKIVVAAFENDLGIWDVLQKSQRVLPNRAANAVDNFVTLIKTFKIRLEKADA
YDTAAFIAKQSGLLKELYDDKTIEGLNRYENVQELLNAIKEFVDDEQQEDKSLEAFIADV
ALLTDADNEDKDNNDHVNLMTIHSAKGLEFKHVFIVGMEEDLFPSQMMLNSRADLEEERR
LFYVALTRAMEKVTLSYALTRYRFGRLKNCEPSRFIEEIDPAYIKVDRKFNRSEPMGDLN
NGSSNSVYAKNLVAQRKTERKAVPPGKKLHTPSPDFAPSDTRTLDTGMKVEHPKFGFGEV
KKMDVQGANRKATIEFENFGEKTLLLTFAKLRIM
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atggattatttaagtcatttgaatcccccgcagagagaaggagttgagaatttggaaggc
cctaccatgatcattgctggtgctggttctgggaaaacacgagtactgacctaccgcatt
gctcaccttataaccgttaaaaatgttgatccttttagcattttggctttgacctttacc
aataaagctgctaaggaaatgagggaaagaattgaaaaaatagtgggaactgatgcccgt
aatttatggatgggaactttccactcggtttttgccagaattctacgagcagaagccgat
aaattaggatatccaagcaatttcactatttacgatacggaagattccaaatctttgata
agggcaattgttagggaaatgggattggatgataaagtctataagcaaaatgtagtctat
agcagaatttcaggagccaagaataatctggtttcctggcagaattacatgaacaattca
gtttatgtttccgaggatgagcaagcccagaaacctaaaatgggagccatctacaaagag
tatgtgcagcggtgtttccgctcaggggcaatggattttgatgacttactattcaatacc
aatgttttatttcgtgatcatctggatgtgctgaataagtatcaacagcgatttaaatac
gtgatgatagatgagtttcaagacaccaatatttctcaatatttaattaccaaacgtctt
tctgcagtaaatcagaatatctgtatagtaggagatgatgcccagagtatttatgccttt
cgtggtgccaacattcaaaacatcttgaatttcgaaaaagattatcctgatttaagggtg
attaaattagagcaaaattatagaagtactcagaatattgtaaacgcagctaattcggtt
atcctgaaaaatgcagcccagcttaagaaaaaggtctggacgcaaaatgatgatggcgag
ttggtgcatttgataaaatctacttctgataatgaagagggaaggctagtagcttcttct
atttttgaagacaagaacaacaaaaaacttgagaataaggattttgctattctctataga
accaacagccaatcccgtgcgatggaggaagctcttagaaaaagcaatattccttatcga
atctacggaggtttatctttttaccaaagaaaggaaatcaaggatttactagcttatcta
cgatttaccatcaaccataatgatgaacaatcattcagaaggattatcaatttacccaaa
agaggaattggagcttcttctgtagataaaatagtggtagcggcttttgaaaatgatttg
ggaatctgggacgtactgcaaaagagccagagagtgctccctaaccgagccgccaatgcc
gttgataattttgtcactctaatcaaaaccttcaaaattaggctagagaaagcagatgct
tatgatacggcagcttttattgctaagcaaagtggtttgctaaaagagttatatgatgat
aaaaccattgaagggctgaatcgttacgagaacgttcaggaattgctcaacgcaatcaag
gaattcgtggatgacgaacagcaagaagataaatccctcgaagctttcattgctgatgtg
gctttattgaccgatgccgacaatgaagataaagacaataacgaccatgtaaacttgatg
accatccactctgcaaagggactggaatttaaacatgtgtttatagtgggaatggaagag
gatctttttccttcgcagatgatgttgaatagccgtgccgacttggaggaggagagaagg
ttgttttatgtggcattgaccagagctatggaaaaggtgactttaagctatgccttaacc
cgttatcgttttggaagattgaaaaactgcgagccaagccgatttatagaggagatagat
cctgcttatattaaagtagatcggaaatttaatcggtctgaacctatgggggatttgaat
aatggtagtagtaatagtgtttatgctaaaaacttagtagctcaaaggaaaacggaaaga
aaagcagttcctccaggtaagaaactacatactccatcacctgattttgctcctagtgat
actcgtactttagatacaggaatgaaagtagaacatcctaaatttggttttggagaggtt
aagaaaatggatgttcaaggggcgaacagaaaagcaaccattgaatttgagaattttggt
gaaaagacactgctgttaactttcgctaagttgagaataatgtga
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