Marivirga tractuosa: Ftrac_1440
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Entry
Ftrac_1440 CDS
T01365
Name
(GenBank) exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03410
Base excision repair
mtt03430
Mismatch repair
mtt03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Ftrac_1440
03430 Mismatch repair
Ftrac_1440
03440 Homologous recombination
Ftrac_1440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mtt03400
]
Ftrac_1440
DNA repair and recombination proteins [BR:
mtt03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Ftrac_1440
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Ftrac_1440
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Ftrac_1440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Zmiz1_N
Motif
Other DBs
NCBI-ProteinID:
ADR21430
UniProt:
E4TMZ9
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All DBs
Position
1753487..1755196
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AA seq
569 aa
AA seq
DB search
MPKQKKWIIASEPEQKMIHELSQSININPVLSKILLSRGISNFEEAKTFFRPSIEDCHDP
FLMKDMPIAVERLIKALDNHESILVYGDYDVDGSTSVAMMYSFLKSYCKNLYYYIPDRYV
EGYGISYKGIDYAKEKNCSLIISLDCGIKAIDKVDYANSENIDFIICDHHNPSEKLPQAV
AVLDPKRKDCPYPFKELSGCGVGFKLIQAFCIQKEIPEHHAFELLDLVAISIAADIVAVT
GENRILAFYGLEKINFNPRPGIKALIQASGLKEKITISNLVFQLGPRINAAGRIDHAHLA
VRLLTAIHEDEALIIAENVSHKNTTRKDFDQNITSEALSTIEENTSMLSAKSTVLFNKNW
HKGVIGIVASRCIEHHYRPTIIMTESNGKATGSARSVDGFDLYSAIESCKEYLEQFGGHK
HAAGLTLAIDQIPSFAAAFEAVVQKNITEDQLIPKVKIDSYIEIDQITDKFYSILSQMDP
FGPGNMQPVFAAKNLSVLGEPLILKEKHLKLTVKDRSGKNKITAIGFGMAEYKALIMNSN
AFELAFTIQENHFNGLKSLQLYLKDIRID
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacagaaaaagtggattatagcgtcagaacctgaacaaaaaatgattcatgaa
ttgagtcaatccatcaatataaatcctgtcctatcaaaaattctcctatcaagaggcatc
agtaattttgaagaagcaaaaactttttttagaccttcaattgaagactgccatgatccg
tttttgatgaaggatatgccaatcgctgttgagcgactaataaaagctcttgacaatcac
gaatctattctggtatatggcgattatgatgtggatggatctacctcagtagctatgatg
tacagcttcttaaaaagctattgtaaaaatctttactactacattcctgataggtatgtg
gaagggtatgggatttcctataaaggcattgattatgcaaaagagaagaactgcagccta
attatttctttggattgtggcattaaagctatagataaagttgattacgcaaattctgaa
aatattgacttcataatatgtgatcatcacaatccaagtgaaaaactacctcaagccgta
gctgttctggatccaaagagaaaggactgtccctaccctttcaaagaattatccggatgc
ggggtcggttttaagctcatacaagcattttgcattcaaaaagaaatccctgaacatcat
gcttttgaattacttgatctagttgccataagtatagcagcagatattgtggcagtgaca
ggagaaaatagaatacttgcattttatggattggagaaaataaatttcaatcccagacca
gggataaaagctttgattcaagcctcgggattgaaagaaaaaattaccatttcaaattta
gtatttcaacttggccccagaataaatgctgccggcagaattgatcacgctcatttagcg
gtaagattattaaccgccattcatgaagacgaagcactcattatagcagaaaatgtttcc
cataaaaacaccacaagaaaagattttgatcagaacattacgagtgaagctttaagtaca
attgaagaaaacaccagtatgctttcggcaaaaagtactgtgttattcaataaaaattgg
cataaaggtgttattggaatagtagcttctagatgtattgaacatcattaccgacccact
atcattatgactgaatccaatggaaaagcaacgggttcagctcgttctgtagacgggttt
gatctatattcggctattgagtcatgtaaagaatatttggaacaattcggaggacacaaa
catgcagcaggattaacacttgcaatagatcaaatacctagttttgctgctgcttttgaa
gctgtagttcaaaaaaatattaccgaggatcaacttatcccaaaagtaaaaattgatagc
tacattgaaatagatcaaattacggataagttttattccatattaagtcaaatggatcct
ttcggaccaggcaatatgcaacctgtttttgctgcaaaaaacttatctgttttaggtgaa
cctttaattcttaaagaaaaacatttaaaacttactgtaaaggatcgaagtggaaaaaat
aaaatcactgccattggatttggaatggcagaatataaagcacttattatgaattcaaat
gcatttgagttagcttttacgatacaagaaaaccactttaatggtttgaaatctttacag
ctttatttaaaagatatccgcattgattaa
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