Marivirga tractuosa: Ftrac_1871
Help
Entry
Ftrac_1871 CDS
T01365
Name
(GenBank) DEAD/DEAH box helicase domain protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mtt
Marivirga tractuosa
Pathway
mtt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mtt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Ftrac_1871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mtt03019
]
Ftrac_1871
Enzymes [BR:
mtt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Ftrac_1871
Messenger RNA biogenesis [BR:
mtt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Ftrac_1871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Helicase_C_2
DUF1497
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ADR21859
UniProt:
E4TSP9
LinkDB
All DBs
Position
2236712..2238031
Genome browser
AA seq
439 aa
AA seq
DB search
MSQDTASFQDFKLNKQLFNAIDDLGYQKPSEIQVKAIPRILNGHDVIGIAQTGTGKTAAF
VLPLLMKLKYAQGHDPRALIIAPTRELVMQVYENILELGKYTDLRTVCLYGGIGPKKQAQ
EVAEGCDIIVATPGRLLDIYSAGVLQPKQIKTFILDEADRMMDMGFMPQIRRVLELLPMK
KQNLFFSATFPEKVEKYAYEFTDFPEKVEVTPETMTAELIEQSLYHVPNFLTKINLLKYL
FENEDFSRVLIFVRTRKNANNVYSFIERKISEEVRVIHANKAQSTRINAINEFKSGNVRV
LVSTDVTARGIDVEEVSHVINFEVPNKYEDYVHRIGRTGRAEHHGIAISFVDPSDVYHIN
KIEELIQKKIKVIDLPKEIELMDTLPSEKKDMEQEIDRQKHLENPDFQGAFHEKKKKNLS
GKARDKAFGNKPKDKRRKK
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagataccgcatcctttcaagattttaaactcaacaaacaattattcaatgcc
attgatgatttgggttatcaaaaaccttctgaaattcaagtaaaagcaatccctaggatt
ttgaatggacatgatgttattggcattgcgcaaactgggacaggcaaaacagcagctttt
gtattgccacttttaatgaaattgaaatatgctcaaggtcacgaccccagggctttgatc
atagcccctacccgcgaattggtgatgcaggtatatgaaaacattcttgagttggggaaa
tacactgatttacgaactgtttgcctttatggtggaattggtccaaaaaaacaagcacaa
gaagtagccgaaggttgtgatattatagtcgcaactcccggcaggcttttagatatttat
agtgctggcgtattacaacccaaacaaatcaaaacttttatattggatgaggctgacaga
atgatggacatgggatttatgccgcaaatccgtagggttttggaacttttgccgatgaaa
aagcaaaacctatttttctctgctacctttcctgagaaggttgaaaaatatgcttatgaa
tttacagacttcccagaaaaagtagaagtcacccctgaaactatgactgccgaattaatt
gagcagtctttatatcacgtacccaatttcctaaccaaaataaacctcttgaaatatctt
tttgaaaatgaagatttcagtagggttttgatttttgtaaggactcgaaagaatgctaat
aatgtttacagttttattgagcggaaaatcagtgaggaagtgcgtgtgattcatgccaat
aaggcacaatctacccgaatcaatgccatcaatgaattcaaatcggggaatgtgagggta
ttagtaagcactgatgtaacggccaggggaattgatgttgaggaagtgagccatgtaatc
aactttgaagtccctaataaatatgaggattacgttcaccgtatcgggcgaactggccga
gcagaacaccatgggattgccattagctttgttgacccttccgatgtttaccatatcaat
aaaattgaggaattaattcaaaagaaaatcaaggtaattgatttgccaaaagaaatcgaa
ttgatggataccttgccgtcagagaaaaaggatatggagcaggaaattgaccggcaaaag
catctagaaaatcctgatttccaaggcgctttccatgaaaagaaaaagaagaatctaagc
ggaaaagccagggacaaggcatttggcaacaagccgaaggataagcggaggaagaaatga
DBGET
integrated database retrieval system
