Micromonospora tulbaghiae: CSH63_07310
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Entry
CSH63_07310 CDS
T05651
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mtua
Micromonospora tulbaghiae
Pathway
mtua00040
Pentose and glucuronate interconversions
mtua01100
Metabolic pathways
mtua02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mtua00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CSH63_07310
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CSH63_07310
Enzymes [BR:
mtua01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CSH63_07310
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AYF27236
UniProt:
A0A386WFP5
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Position
complement(1680060..1681403)
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AA seq
447 aa
AA seq
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MRTRTAVVAALTAALVLTTAAPAPAAPGGPSRAAELLGRQTLPANDGWAAAGTGTTGGSA
AAPDRVRVVRTRAELVAALGGDNATNAADASPKIVYVAGTVDGFEGPDGTPLDCADLADP
EYSLPAYLAAYDPATWGRTNPSGPLEAARVRSVAAQTRQTQINVGSNTTIVGLRGARLTG
LTLMIDRVDNVIVRNIEFADARDCFPAWSPTDGDTGNWNSQYDQISVRRSEHVWIDHNTF
TDGDNPDSAQPVYFGRPWQVHDGSLDVTHTASLVTASWNRFTGRDKVMLIGSSNTVGPDV
GRLNVTVRHNLFDGTLQRLPRVRFGQVDVHENHYRLGAPGFAYALGVGVQSALYAENNFF
TLTGDTTPADLLYDWGGTALTERGSWVRQGDRLPRPVDLRAAYNAAHDPDLGGDAGWTPT
LRAARPLPAPLVPFVVDAWAGAGRLPL
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgcgtacccgaaccgcagtcgtcgcggcgctgaccgccgcgctcgtcctcaccaccgcc
gcgcccgcgccggccgcacccggcggtccgtcccgggccgccgaactgctcgggcgccag
accctcccggcgaacgacggctgggccgccgcgggcaccggcaccaccggcgggtcggcc
gccgcgccggaccgggtacgcgtcgtgcgtacccgggccgagctggtcgccgcgctcggc
ggcgacaacgccacgaacgccgccgacgccagccccaagatcgtgtacgtggccggaacc
gtcgacggtttcgagggcccggacggcaccccgctggactgcgcggacctggccgacccg
gagtactcgctgcccgcctacctggccgcgtacgacccggcgacctggggccggacgaac
ccgagcgggccgctggaggccgcgcgcgtgcggtcggtggccgcccagacccggcagacc
cagatcaacgtcggctcgaacaccacgatcgtcgggctgcgcggcgcccggctcaccggc
ctgacgctgatgatcgaccgggtggacaacgtgatcgtccgcaacatcgagttcgccgac
gcccgggactgcttcccggcctggtccccgaccgacggcgacaccggcaactggaactcc
cagtacgaccagatctcggtccggcgcagcgagcacgtctggatcgaccacaacacgttc
accgacggcgacaacccggacagcgcgcagcccgtctacttcggccggccctggcaggtg
cacgacggctcgctcgacgtcacgcacaccgccagcctggtcaccgcctcctggaaccgg
ttcaccggccgggacaaggtgatgctcatcggctcgtcgaacacggtcggcccggacgtg
ggccggctcaacgtcacggtgcggcacaacctgttcgacggcacgctgcaacggctgccc
cgggtgcggttcggccaggtcgacgtgcacgagaaccactaccggctcggcgcgcccggc
ttcgcgtacgccctcggcgtcggtgtgcagtccgcgctgtacgcggagaacaacttcttc
acgctcaccggcgacaccaccccggccgacctgctgtacgactggggcggcaccgcgctc
accgagcggggcagctgggtccggcagggcgaccgcctgccccggccggtggacctgcgc
gccgcgtacaacgccgcccacgaccccgacctcggcggcgacgccgggtggacgcccacg
ctccgcgccgcccggccgctgccggccccgctggtcccgttcgtcgtggacgcctgggcc
ggcgccggccggctgccgctctga
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